BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 215428 (1125 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g09920.1 261 4e-70 At4g15420.1 82 6e-16 At5g65890.1 31 1.5 At5g05170.1 30 2.6 At3g05630.1 29 4.4 At5g18560.1 29 4.4 At2g31830.1 29 4.4 At5g62310.1 29 5.7 At1g48490.1 28 7.4 At4g32620.1 28 7.4 At5g25520.1 28 9.7 >At1g09920.1 Length = 193 Score = 261 bits (668), Expect = 4e-70 Identities = 125/193 (64%), Positives = 147/193 (76%), Gaps = 1/193 (0%) Frame = +3 Query: 159 MAVASDQATSICSHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHFLSTHAP 338 M A+ + T +C+HCDR IPS N+DLH HC+RNLEKCKIC DMVP+K AEEH+L+THAP Sbjct: 1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60 Query: 339 VACSLCSETMEREILAVHRGENCPKRIVTCEYCEFPLPAIDLFEHQEVCGNRTELCHLCS 518 +ACS+C ET+EREI H+GE CPKRIVTCE+CEFPLPA+DL EHQEVCGNRTELC+ C+ Sbjct: 61 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120 Query: 519 RYIRLRERDVHESRCNGMISNVAESSRNTHTAERD-RGPPRRQPQEFSRKRLLFTIAITG 695 Y+RLRER HE++C G V S R AE D G RR S KRL FTIAITG Sbjct: 121 SYVRLRERYNHETKCPG---TVESSRRIPRAAEGDGNGRRRRDGNGVSNKRLFFTIAITG 177 Query: 696 IAVLLGSLLFQRK 734 IAV++GSL FQRK Sbjct: 178 IAVIIGSLFFQRK 190 >At4g15420.1 Length = 562 Score = 82.0 bits (201), Expect = 6e-16 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 31/168 (18%) Frame = +3 Query: 168 ASDQATSICSHCDRAIPSTNLDLHFAHCSR--------------------NLEKCKICED 287 +SD T C +C +IPS ++ LH +CSR N C+ C Sbjct: 395 SSDVDTVECRNCKHSIPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGK 454 Query: 288 MVPRKFAEEHFLSTHAPVACSLCSETMEREILAVHRGENCPKRIVTCEYC----EFPLPA 455 + E+H H P+ C C +E+E + H+G++CP R++ C +C E A Sbjct: 455 ALQPTEMEKHLKVFHEPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSA 513 Query: 456 ID-------LFEHQEVCGNRTELCHLCSRYIRLRERDVHESRCNGMIS 578 D + EH+ CG+RT C C R + L++ D+H+ +G S Sbjct: 514 ADTRDRMRGMSEHESTCGSRTAPCDSCGRSVMLKDMDIHQIAVHGKSS 561 >At5g65890.1 Length = 478 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%) Frame = -2 Query: 362 LATQRTGNRSMSAQEMFLRKLSRNHILTDFTFFKI-----PGAVSKMKIKIGGRNCSVT 201 + + RTG + Q R++ + H+ T+ T F+I PG +S++ + C VT Sbjct: 103 ICSSRTGGITKEMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVT 161 >At5g05170.1 Length = 1066 Score = 30.0 bits (66), Expect = 2.6 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Frame = +3 Query: 336 PVACSLCSETMEREILAVHRGENCPKRIVTCEYCEFPLPAIDLFEHQEVCGNRTELCHLC 515 P C +CS+ + + + R V C+ C FP+ +E++ GN++ C C Sbjct: 17 PQTCQICSDNVGKTVDG--------DRFVACDICSFPV-CRPCYEYERKDGNQS--CPQC 65 Query: 516 -SRYIRLR 536 +RY RL+ Sbjct: 66 KTRYKRLK 73 >At3g05630.1 Length = 1040 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Frame = -1 Query: 264 QDSGSSEQNED-----QDWWKELLCHSDCRC 187 QD G + + D DWW ++ SDCRC Sbjct: 658 QDPGETSEESDLDEAVNDWWWQIGKQSDCRC 688 >At5g18560.1 Length = 330 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = -1 Query: 423 SRSFLGNFHLYEQLKSHVPLSRYTKNRQPEHECSRNV-PPQTF*EPYPHRFYIFQDSGSS 247 ++SFL N + H Y + +QP+H + V P +F P H+ Q G+S Sbjct: 118 NQSFLPNSSPQFVIDHHPHYQNYHQPQQPKHTLPQTVLPAASFKTPVRHQSVDIQAFGNS 177 Query: 246 EQNEDQD 226 QN + Sbjct: 178 PQNSSSN 184 >At2g31830.1 Length = 1145 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/67 (26%), Positives = 27/67 (40%) Frame = +3 Query: 153 GVMAVASDQATSICSHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHFLSTH 332 G+ S + I + CDR I N + + CS KC + + + + S H Sbjct: 861 GLGGYDSGEKKRIPAWCDRVIYRDNQSISYTECSL---KCPVVSSTIMYEACMDVTESDH 917 Query: 333 APVACSL 353 PV C L Sbjct: 918 KPVRCKL 924 >At5g62310.1 Length = 1169 Score = 28.9 bits (63), Expect = 5.7 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Frame = +3 Query: 258 NLEKCKICEDMVPRKFAEEHFLSTHAPVACSLCSETMEREIL----AVHRGENCPKRIVT 425 N K K + P+ + +E+ + H+P S + +R L A H+ ++ Sbjct: 432 NTPKAKGESKIQPKVYGDENAENLHSP---SGQPASADRSALWGFWADHQCVTYDNSMI- 487 Query: 426 CEYCEFPLPAIDLFEHQEVCGNRTELCHLCSRYIRLRERDVHES 557 C CE +P + + EH +C + C L + LR V ES Sbjct: 488 CRICEVEIPVVHVEEHSRIC-TIADRCDLKGINVNLRLERVAES 530 >At1g48490.1 Length = 879 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = +3 Query: 147 WG--GVMAVASDQATSICSHCDRAIPSTNLDLHFAHCS 254 WG G + S++++ IC C+ IP+T+++ H C+ Sbjct: 178 WGYWGHQSCISEESSIICRICEEEIPTTHVEDHSRICA 215 >At4g32620.1 Length = 1545 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +3 Query: 444 PLPAIDLFEHQEVCGNRTELCHLCSRYIRLRERDV 548 P+P I + E G TE S+Y R E DV Sbjct: 1148 PIPGIRMIERDNFDGTETEFIRSSSKYFRQTETDV 1182 >At5g25520.1 Length = 736 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/86 (24%), Positives = 33/86 (38%) Frame = +3 Query: 348 SLCSETMEREILAVHRGENCPKRIVTCEYCEFPLPAIDLFEHQEVCGNRTELCHLCSRYI 527 S E++ + VH E PK E E +P D E CG + + + Sbjct: 212 SKMKESLAAALALVHEHEESPKEKKNSETEEASVPVADSNEPASACGTSVTVGEDITPAM 271 Query: 528 RLRERDVHESRCNGMISNVAESSRNT 605 R+ + NG + ESS++T Sbjct: 272 STRDESFEQKNGNGRTLS-QESSKDT 296 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,026,884 Number of Sequences: 28581 Number of extensions: 482089 Number of successful extensions: 1286 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1278 length of database: 12,141,370 effective HSP length: 101 effective length of database: 9,254,689 effective search space used: 2526530097 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= stgn_184441 (620 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g09920.1 222 1e-58 At4g15420.1 78 3e-15 At4g29090.1 30 1.1 At3g08870.1 30 1.1 At1g48490.1 30 1.1 At3g05630.1 30 1.1 At5g18560.1 30 1.1 At2g31830.1 29 2.4 At5g05170.1 28 3.1 At5g62310.1 28 3.1 At3g51650.1 28 4.0 At5g21970.1 28 4.0 At2g41820.1 28 4.0 At2g17600.1 28 5.3 At3g51640.1 27 6.9 At5g25520.1 27 6.9 At2g28105.1 27 6.9 At4g14420.1 27 9.0 At2g20570.1 27 9.0 At4g33510.1 27 9.0 At2g21850.1 27 9.0 >At1g09920.1 Length = 193 Score = 222 bits (566), Expect = 1e-58 Identities = 100/161 (62%), Positives = 123/161 (76%) Frame = +3 Query: 138 MAVVSDQATSICSHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHFLSTHAP 317 M + + T +C+HCDR IPS N+DLH HC+RNLEKCKIC DMVP+K AEEH+L+THAP Sbjct: 1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60 Query: 318 VACSLCSETMEREILAVHRGENCPKRIVTCEYCEFPLPAIDLFEHQEVCGNRTELCHLCS 497 +ACS+C ET+EREI H+GE CPKRIVTCE+CEFPLPA+DL EHQEVCGNRTELC+ C+ Sbjct: 61 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120 Query: 498 TYITLRERDVHDSRCNGIINNVAESSRNTHTAERDRGPPRR 620 +Y+ LRER H+++C G + ESSR A G RR Sbjct: 121 SYVRLRERYNHETKCPGTV----ESSRRIPRAAEGDGNGRR 157 >At4g15420.1 Length = 562 Score = 78.2 bits (191), Expect = 3e-15 Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 31/164 (18%) Frame = +3 Query: 150 SDQATSICSHCDRAIPSTNLDLHFAHCSR--------------------NLEKCKICEDM 269 SD T C +C +IPS ++ LH +CSR N C+ C Sbjct: 396 SDVDTVECRNCKHSIPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGKA 455 Query: 270 VPRKFAEEHFLSTHAPVACSLCSETMEREILAVHRGENCPKRIVTCEYC----EFPLPAI 437 + E+H H P+ C C +E+E + H+G++CP R++ C +C E A Sbjct: 456 LQPTEMEKHLKVFHEPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSAA 514 Query: 438 D-------LFEHQEVCGNRTELCHLCSTYITLRERDVHDSRCNG 548 D + EH+ CG+RT C C + L++ D+H +G Sbjct: 515 DTRDRMRGMSEHESTCGSRTAPCDSCGRSVMLKDMDIHQIAVHG 558 >At4g29090.1 Length = 576 Score = 30.0 bits (66), Expect = 1.1 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -1 Query: 356 LTFHCLATQRTCNRSMSAQEMFLCKLSRNHILTDFTFFKIPGAVSKMKIEIGG 198 L + L+ + C R S CK + NH+L TF ++ A+S + I +GG Sbjct: 284 LAYRHLSKESACIRCPS------CKETVNHLLFKCTFARLTWAISSIPIPLGG 330 >At3g08870.1 Length = 694 Score = 30.0 bits (66), Expect = 1.1 Identities = 12/24 (50%), Positives = 20/24 (83%) Frame = +1 Query: 16 SNKKGYNSQINLLILSINPIRRIL 87 SNKKGYNSQ+ +LI++++ + +L Sbjct: 302 SNKKGYNSQVIVLIVALSIVTLVL 325 >At1g48490.1 Length = 879 Score = 30.0 bits (66), Expect = 1.1 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = +3 Query: 126 WG--GVMAVVSDQATSICSHCDRAIPSTNLDLHFAHCS 233 WG G + +S++++ IC C+ IP+T+++ H C+ Sbjct: 178 WGYWGHQSCISEESSIICRICEEEIPTTHVEDHSRICA 215 >At3g05630.1 Length = 1040 Score = 30.0 bits (66), Expect = 1.1 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Frame = -3 Query: 243 QDSGSSEQNED-----RDWWKELPCHSDCRC 166 QD G + + D DWW ++ SDCRC Sbjct: 658 QDPGETSEESDLDEAVNDWWWQIGKQSDCRC 688 >At5g18560.1 Length = 330 Score = 30.0 bits (66), Expect = 1.1 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = -3 Query: 402 SQSFLGNFHLYEQLKSHVPLSRYTKNMQPEHECSRNV-PLQTF*EPYPHRFYIFQDSGSS 226 +QSFL N + H Y + QP+H + V P +F P H+ Q G+S Sbjct: 118 NQSFLPNSSPQFVIDHHPHYQNYHQPQQPKHTLPQTVLPAASFKTPVRHQSVDIQAFGNS 177 Query: 225 EQN 217 QN Sbjct: 178 PQN 180 >At2g31830.1 Length = 1145 Score = 28.9 bits (63), Expect = 2.4 Identities = 17/61 (27%), Positives = 25/61 (40%) Frame = +3 Query: 150 SDQATSICSHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHFLSTHAPVACS 329 S + I + CDR I N + + CS KC + + + + S H PV C Sbjct: 867 SGEKKRIPAWCDRVIYRDNQSISYTECSL---KCPVVSSTIMYEACMDVTESDHKPVRCK 923 Query: 330 L 332 L Sbjct: 924 L 924 >At5g05170.1 Length = 1066 Score = 28.5 bits (62), Expect = 3.1 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = +3 Query: 315 PVACSLCSETMEREILAVHRGENCPKRIVTCEYCEFPLPAIDLFEHQEVCGNRTELCHLC 494 P C +CS+ + + + R V C+ C FP+ +E++ GN++ C C Sbjct: 17 PQTCQICSDNVGKTVDG--------DRFVACDICSFPV-CRPCYEYERKDGNQS--CPQC 65 Query: 495 ST 500 T Sbjct: 66 KT 67 >At5g62310.1 Length = 1169 Score = 28.5 bits (62), Expect = 3.1 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Frame = +3 Query: 237 NLEKCKICEDMVPRKFAEEHFLSTHAPVACSLCSETMEREIL----AVHRGENCPKRIVT 404 N K K + P+ + +E+ + H+P S + +R L A H+ ++ Sbjct: 432 NTPKAKGESKIQPKVYGDENAENLHSP---SGQPASADRSALWGFWADHQCVTYDNSMI- 487 Query: 405 CEYCEFPLPAIDLFEHQEVCGNRTELCHLCSTYITLRERDVHDS 536 C CE +P + + EH +C + C L + LR V +S Sbjct: 488 CRICEVEIPVVHVEEHSRIC-TIADRCDLKGINVNLRLERVAES 530 >At3g51650.1 Length = 827 Score = 28.1 bits (61), Expect = 4.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = -1 Query: 206 IGGRNCPVTVTADASGLIRNYSHYSAPKGSTKISPFE 96 + G P ++T ++ N + Y +P GS +PFE Sbjct: 751 LSGIESPFSITTQTKSVLNNAAGYRSPTGSGPDNPFE 787 >At5g21970.1 Length = 450 Score = 28.1 bits (61), Expect = 4.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 484 VIFVAHILHSEKEMFMTVDAMES*IMLQNLPGTH 585 VIF+ +L E++M MTV + E NLP H Sbjct: 74 VIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPH 107 >At2g41820.1 Length = 891 Score = 28.1 bits (61), Expect = 4.0 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = -3 Query: 534 CHEHLFLGV*YMCYKDDIILSGSHILPDAQIDQLQAKETR 415 CH+HL + ++ Y+D +L H LP+ + QL + T+ Sbjct: 663 CHDHLVRPIGFVIYEDVALLLHQH-LPNGNLTQLIHESTK 701 >At2g17600.1 Length = 581 Score = 27.7 bits (60), Expect = 5.3 Identities = 23/98 (23%), Positives = 35/98 (35%) Frame = +3 Query: 171 CSHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHFLSTHAPVACSLCSETME 350 C CD+ PS H++ + ++E IC + PRK + L L T Sbjct: 33 CFACDKEEPSPCSTFHYSCTTCDVEFHDICH-VYPRKLTHPYHLQH------PLTLTTQN 85 Query: 351 REILAVHRGENCPKRIVTCEYCEFPLPAIDLFEHQEVC 464 EI + + C +C L F H +C Sbjct: 86 TEIEIISKNPEYGYIFKNCNWCGDDLRDGSQFYHCSIC 123 >At3g51640.1 Length = 827 Score = 27.3 bits (59), Expect = 6.9 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = -1 Query: 206 IGGRNCPVTVTADASGLIRNYSHYSAPKGSTKISPFE 96 + G P + T ++ N + Y +P GS +PFE Sbjct: 751 LSGIESPFSTTTQTKSVLNNAAGYRSPTGSGSDNPFE 787 >At5g25520.1 Length = 736 Score = 27.3 bits (59), Expect = 6.9 Identities = 21/86 (24%), Positives = 33/86 (38%) Frame = +3 Query: 327 SLCSETMEREILAVHRGENCPKRIVTCEYCEFPLPAIDLFEHQEVCGNRTELCHLCSTYI 506 S E++ + VH E PK E E +P D E CG + + + Sbjct: 212 SKMKESLAAALALVHEHEESPKEKKNSETEEASVPVADSNEPASACGTSVTVGEDITPAM 271 Query: 507 TLRERDVHDSRCNGIINNVAESSRNT 584 + R+ NG + ESS++T Sbjct: 272 STRDESFEQKNGNGRTLS-QESSKDT 296 >At2g28105.1 Length = 167 Score = 27.3 bits (59), Expect = 6.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +3 Query: 147 VSDQATSICSHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPR 278 ++D +CS C R +PS N FA S CK C+ P+ Sbjct: 16 LTDYCYRVCSRCQRVLPSDNNG--FASSS----FCKFCKSKEPK 53 >At4g14420.1 Length = 159 Score = 26.9 bits (58), Expect = 9.0 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 178 TVTGQFLPPISIFILLTAPGILKNVKSVRIWFLESLQRNIS*ALMLRLH 324 T TGQ LPP+ + IL+ A LK + + F SL A +L LH Sbjct: 51 THTGQQLPPVDMKILVAAAIALKGIGGLLFVFGSSLG-----AYLLLLH 94 >At2g20570.1 Length = 421 Score = 26.9 bits (58), Expect = 9.0 Identities = 19/67 (28%), Positives = 30/67 (44%) Frame = +3 Query: 183 DRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHFLSTHAPVACSLCSETMEREIL 362 D+A+PS L+L HC L + + + + +H L+ A A + T +R I Sbjct: 176 DKAVPSRILELMGVHC---LTRHNVASHLQKYRSHRKHLLAREAEAA----NWTRKRHIY 228 Query: 363 AVHRGEN 383 V G N Sbjct: 229 GVDTGAN 235 >At4g33510.1 Length = 508 Score = 26.9 bits (58), Expect = 9.0 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +3 Query: 60 FDKSNSENLRF*FKGRDFRGSFWGGVMAVVSDQATSICSHCDRAIPSTNLDLHF-AHCSR 236 FD +E LR F D GSF GGV ++ Q + C R I +L + HC Sbjct: 415 FDAIRAE-LRAFFDVHDQEGSFPGGVHLEMTGQNVTECVGGSRTITYNDLSSRYHTHCDP 473 Query: 237 NLEKCKICE 263 L + E Sbjct: 474 RLNASQSLE 482 >At2g21850.1 Length = 773 Score = 26.9 bits (58), Expect = 9.0 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 1/99 (1%) Frame = +3 Query: 213 LHFAHCSRNLEKCKICEDMVPRKFAEEHFLSTHAPVA-CSLCSETMEREILAVHRGENCP 389 LH++HC L++C+ P A L P++ S+C + R + P Sbjct: 122 LHYSHCHL-LKRCR------PGPDARGSCLLCELPLSPSSVCYGCVHCYSFVHERCIHFP 174 Query: 390 KRIVTCEYCEFPLPAIDLFEHQEVCGNRTELCHLCSTYI 506 + I + PL +D RT LCH+C I Sbjct: 175 REIAHPVHLAHPLKRLDY--------TRTSLCHICGESI 205 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,791,209 Number of Sequences: 28581 Number of extensions: 325486 Number of successful extensions: 919 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 881 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 913 length of database: 12,141,370 effective HSP length: 95 effective length of database: 9,426,175 effective search space used: 1046305425 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cangn_196899 (1052 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g09920.1 252 3e-67 At4g15420.1 77 2e-14 At5g05170.1 33 0.28 At2g17600.1 31 1.0 At2g31770.1 30 2.3 At5g56040.1 30 3.0 At4g01350.1 29 4.0 At2g31830.1 29 5.2 At5g53840.1 28 6.8 At4g29090.1 28 6.8 At2g21850.1 28 8.9 >At1g09920.1 Length = 193 Score = 252 bits (643), Expect = 3e-67 Identities = 119/192 (61%), Positives = 139/192 (72%) Frame = +3 Query: 153 MAVASDQATSICTHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHYLSTHAP 332 M A+ + T +C HCDR IPS N+DLH HC+RNLEKCKIC DMVP+K AEEHYL+THAP Sbjct: 1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60 Query: 333 VACSLCSETMDREILAVHKGEKCPKRIVTCDYCEFPLPAIDLFEHQEVCGNRTELCHLCS 512 +ACS+C ET++REI HKGE CPKRIVTC++CEFPLPA+DL EHQEVCGNRTELC+ C+ Sbjct: 61 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120 Query: 513 RYIRLRERDAHEGTCNGIISSIAESSRNARATXXXXXXXXXXXXXFSKKRLLFTIAITGI 692 Y+RLRER HE C G + S R A S KRL FTIAITGI Sbjct: 121 SYVRLRERYNHETKCPGTVESSRRIPRAAEG--DGNGRRRRDGNGVSNKRLFFTIAITGI 178 Query: 693 AVLLGSLLFQRK 728 AV++GSL FQRK Sbjct: 179 AVIIGSLFFQRK 190 >At4g15420.1 Length = 562 Score = 76.6 bits (187), Expect = 2e-14 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 31/165 (18%) Frame = +3 Query: 162 ASDQATSICTHCDRAIPSTNLDLHFAHCSR--------------------NLEKCKICED 281 +SD T C +C +IPS ++ LH +CSR N C+ C Sbjct: 395 SSDVDTVECRNCKHSIPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGK 454 Query: 282 MVPRKFAEEHYLSTHAPVACSLCSETMDREILAVHKGEKCPKRIVTCDYC----EFPLPA 449 + E+H H P+ C C +++E + H+G+ CP R++ C +C E A Sbjct: 455 ALQPTEMEKHLKVFHEPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSA 513 Query: 450 ID-------LFEHQEVCGNRTELCHLCSRYIRLRERDAHEGTCNG 563 D + EH+ CG+RT C C R + L++ D H+ +G Sbjct: 514 ADTRDRMRGMSEHESTCGSRTAPCDSCGRSVMLKDMDIHQIAVHG 558 >At5g05170.1 Length = 1066 Score = 33.1 bits (74), Expect = 0.28 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = +3 Query: 330 PVACSLCSETMDREILAVHKGEKCPKRIVTCDYCEFPLPAIDLFEHQEVCGNRTELCHLC 509 P C +CS+ + + + G+ R V CD C FP+ +E++ GN++ C C Sbjct: 17 PQTCQICSDNVGKTV----DGD----RFVACDICSFPV-CRPCYEYERKDGNQS--CPQC 65 Query: 510 -SRYIRLRERDAHEG 551 +RY RL+ A G Sbjct: 66 KTRYKRLKGSPAIPG 80 >At2g17600.1 Length = 581 Score = 31.2 bits (69), Expect = 1.0 Identities = 24/98 (24%), Positives = 39/98 (39%) Frame = +3 Query: 186 CTHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHYLSTHAPVACSLCSETMD 365 C CD+ PS H++ + ++E IC + PRK ++L L T + Sbjct: 33 CFACDKEEPSPCSTFHYSCTTCDVEFHDICH-VYPRKLTHPYHLQH------PLTLTTQN 85 Query: 366 REILAVHKGEKCPKRIVTCDYCEFPLPAIDLFEHQEVC 479 EI + K + C++C L F H +C Sbjct: 86 TEIEIISKNPEYGYIFKNCNWCGDDLRDGSQFYHCSIC 123 >At2g31770.1 Length = 544 Score = 30.0 bits (66), Expect = 2.3 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 3/93 (3%) Frame = +3 Query: 324 HAPVACSLCSETMDREILAVHKGEKCPKRIVTCDYCEFPLPAIDLFEHQEV---CGNRTE 494 H+PV C S+ + + C C+ P+ D H CG+ E Sbjct: 255 HSPVDCDTVSKWIFKNQDESENKNWMLANSKPCPECKRPIEKNDGCNHMTCSAPCGH--E 312 Query: 495 LCHLCSRYIRLRERDAHEGTCNGIISSIAESSR 593 C +C + R H G CN + AES R Sbjct: 313 FCWICLKAYR-----RHSGACNRFVVEQAESKR 340 >At5g56040.1 Length = 954 Score = 29.6 bits (65), Expect = 3.0 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 802 IKSLNFLTVKELTISNNYMPKISVCTSS*YVN 897 +K+LNF+ + E + N P+IS CTS +V+ Sbjct: 480 LKNLNFIDISENRLIGNIPPEISGCTSLEFVD 511 >At4g01350.1 Length = 653 Score = 29.3 bits (64), Expect = 4.0 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 10/101 (9%) Frame = +3 Query: 165 SDQATSICTHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHYLSTHA----- 329 +D A + C C + P+ N+ H + C N C C P E ++ TH Sbjct: 189 TDDAETTCLLCGKK-PAENMLYHCSVC--NFTSCLGCTKNPPLLVIE--HIKTHKHPLIL 243 Query: 330 -----PVACSLCSETMDREILAVHKGEKCPKRIVTCDYCEF 437 P C +C G+KC + C C+F Sbjct: 244 FPRRIPCICDIC-------------GKKCEFAVYVCPQCDF 271 >At2g31830.1 Length = 1145 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/67 (26%), Positives = 26/67 (38%) Frame = +3 Query: 147 GVMAVASDQATSICTHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEEHYLSTH 326 G+ S + I CDR I N + + CS KC + + + + S H Sbjct: 861 GLGGYDSGEKKRIPAWCDRVIYRDNQSISYTECSL---KCPVVSSTIMYEACMDVTESDH 917 Query: 327 APVACSL 347 PV C L Sbjct: 918 KPVRCKL 924 >At5g53840.1 Length = 445 Score = 28.5 bits (62), Expect = 6.8 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = -2 Query: 718 KRSEPNKTAMPVIAIVNRSRFLENSCGCLLGGPRSLSVARAFLEDSAILLMIPLHV 551 K+ E + +P +V+ +F++ LLG L VAR FLE+S IL + L + Sbjct: 354 KKEEVMSSTVPPPCLVSSLKFVKLESQ-LLGCGTELKVARYFLENSTILEKLTLKI 408 >At4g29090.1 Length = 576 Score = 28.5 bits (62), Expect = 6.8 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 302 CKFSRNHILTDFTFFKIPGAVSKMKIEIGG 213 CK + NH+L TF ++ A+S + I +GG Sbjct: 301 CKETVNHLLFKCTFARLTWAISSIPIPLGG 330 >At2g21850.1 Length = 773 Score = 28.1 bits (61), Expect = 8.9 Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Frame = +3 Query: 132 GSFW-CGVMAVASDQATSICTHCDRAIPSTNLDLHFAHCSRNLEKCKICEDMVPRKFAEE 308 GSF+ C + D ++ R S +L LH++HC L++C+ P A Sbjct: 90 GSFYKCKECEIYLDMGCALIASIFRGWDSKDL-LHYSHCHL-LKRCR------PGPDARG 141 Query: 309 HYLSTHAPVACSLCSETMDREILAVHKGEKC---PKRIVTCDYCEFPLPAIDLFEHQEVC 479 L P++ S VH E+C P+ I + PL +D Sbjct: 142 SCLLCELPLSPSSVCYGCVHCYSFVH--ERCIHFPREIAHPVHLAHPLKRLDY------- 192 Query: 480 GNRTELCHLCSRYI 521 RT LCH+C I Sbjct: 193 -TRTSLCHICGESI 205 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,560,589 Number of Sequences: 28581 Number of extensions: 489000 Number of successful extensions: 1303 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1244 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1296 length of database: 12,141,370 effective HSP length: 101 effective length of database: 9,254,689 effective search space used: 2304417561 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_121064 (1019 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g09920.1 259 2e-69 At4g15420.1 76 4e-14 At4g16790.1 32 0.59 At2g01620.1 32 0.59 At2g31830.1 30 2.2 At5g26190.1 30 2.9 At2g38680.1 30 2.9 At5g05170.1 28 6.5 At5g44030.1 28 6.5 At5g16850.1 28 8.5 At5g63730.1 28 8.5 At3g46810.1 28 8.5 >At1g09920.1 Length = 193 Score = 259 bits (662), Expect = 2e-69 Identities = 123/195 (63%), Positives = 146/195 (74%), Gaps = 1/195 (0%) Frame = +1 Query: 250 MAVASDDATRNCSHCDRVIPSSNFDLHFAHCSRKLEKCKICGDMVPRVSAEEHFLSTHAP 429 M A+ + T C+HCDR IPS N DLH HC+R LEKCKICGDMVP+ AEEH+L+THAP Sbjct: 1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60 Query: 430 VSCSLCSETMEREVLAIHKGENCPQRIVTCEFCEFPLPAIDLLEHQEVCGNRTELCYLCN 609 ++CS+C ET+ERE+ HKGE CP+RIVTCEFCEFPLPA+DL EHQEVCGNRTELCY CN Sbjct: 61 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120 Query: 610 RYIRLCERIGHDSRCTGVADNIAESSRATRPVERD-RVPQRRQPNEFSRKRLLFTIAITG 786 Y+RL ER H+++C G ++ S R R E D +RR N S KRL FTIAITG Sbjct: 121 SYVRLRERYNHETKCPGTVES---SRRIPRAAEGDGNGRRRRDGNGVSNKRLFFTIAITG 177 Query: 787 IAVLLGSLLFQRKTE 831 IAV++GSL FQRK E Sbjct: 178 IAVIIGSLFFQRKPE 192 >At4g15420.1 Length = 562 Score = 75.9 bits (185), Expect = 4e-14 Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 33/180 (18%) Frame = +1 Query: 184 GICCYKNRVFVGTSGIFVKWAKMAVAS--DDATRNCSHCDRVIPSSNFDLHFAHCSR--- 348 G Y+ V V S K + AV+S D T C +C IPS + LH +CSR Sbjct: 368 GTVKYQVSVLVQESIDGAKVGERAVSSSSDVDTVECRNCKHSIPSRSIALHEVYCSRHNV 427 Query: 349 -----------KLEK------CKICGDMVPRVSAEEHFLSTHAPVSCSLCSETMEREVLA 477 ++E+ C+ CG + E+H H P++C C +E+E + Sbjct: 428 VCNHHGCGIVLRVEEAKNHLHCEKCGKALQPTEMEKHLKVFHEPLTCG-CGIVLEKEQMV 486 Query: 478 IHKGENCPQRIVTCEFC----EFPLPAID-------LLEHQEVCGNRTELCYLCNRYIRL 624 H+G++CP R++ C FC E A D + EH+ CG+RT C C R + L Sbjct: 487 QHQGKDCPLRLIACRFCGDMVEAGNSAADTRDRMRGMSEHESTCGSRTAPCDSCGRSVML 546 >At4g16790.1 Length = 474 Score = 32.0 bits (71), Expect = 0.59 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Frame = -2 Query: 532 IHKIRMLLSSEGSFHPYV*PKLPVPLSHCK-----------ENKTPEHECLRSAPQQILW 386 +HK + + G FHP P P P+ + K K+ E + R+AP+++ W Sbjct: 317 VHKTKF---AGGEFHPPPPPPPPPPVEYYKSPPTKFRLSNERRKSSEQKMKRNAPKKVWW 373 Query: 385 EPYHHRFYIFPTSESSEQNASQNLKKVSL 299 P ES EQ+ +N ++ +L Sbjct: 374 SD--------PIVESKEQDTEKNDQRSNL 394 >At2g01620.1 Length = 293 Score = 32.0 bits (71), Expect = 0.59 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 13/117 (11%) Frame = +1 Query: 391 VSAEEHFLSTHAPVSCSLCSETMEREVLAIHKGENCPQR----------IVTCEFCEFPL 540 +SA +LS+ + +C + E ++ E+C Q+ I C C L Sbjct: 155 LSALYTYLSSEGTIDLEVCPKCDEVRMIPSCSRESCNQKQRKCRGCWLCIPRCAECAVCL 214 Query: 541 PAIDLLEHQEVCGNRTELCYLCNRYIRLCERIGHDSRCTGVAD---NIAESSRATRP 702 D + CGN LC C + C R + CT + IA + A+RP Sbjct: 215 VGSDTESQEAACGNDDVLCLECWLVLPKC-RFCNKPYCTNHSSRRHEIAITDAASRP 270 Score = 28.1 bits (61), Expect = 8.5 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%) Frame = +1 Query: 283 CSHCD--RVIPSSNFDLHFAHCSRKLEKCKICGDMVPRVSAEEHFLSTHAPVSCSLC--- 447 C CD R+IPS + + C++K KC+ C +PR + C++C Sbjct: 173 CPKCDEVRMIPSCSRE----SCNQKQRKCRGCWLCIPRCA------------ECAVCLVG 216 Query: 448 SETMEREVLAIHKGENCPQ---RIVTCEFCEFP 537 S+T +E + C + + C FC P Sbjct: 217 SDTESQEAACGNDDVLCLECWLVLPKCRFCNKP 249 >At2g31830.1 Length = 1145 Score = 30.0 bits (66), Expect = 2.2 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = +1 Query: 262 SDDATRNCSHCDRVIPSSNFDLHFAHCSRKLEKCKICGDMVPRVSAEEHFLSTHAPVSCS 441 S + R + CDRVI N + + CS KC + + + + S H PV C Sbjct: 867 SGEKKRIPAWCDRVIYRDNQSISYTECSL---KCPVVSSTIMYEACMDVTESDHKPVRCK 923 Query: 442 L 444 L Sbjct: 924 L 924 >At5g26190.1 Length = 557 Score = 29.6 bits (65), Expect = 2.9 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 16/105 (15%) Frame = +1 Query: 388 RVSAEEHFL-STHAPVSCSLCS-ETMEREVLAIHKGENCPQRIVTCEFCEFPLPAIDLLE 561 +++ HFL T+ C +CS E +E P +++TC CEF L D +E Sbjct: 16 KLAVHRHFLFPTNISSKCRVCSIERLE------------PTKVLTCNQCEFSLHE-DCIE 62 Query: 562 -------------HQEVCG-NRTELCYLCNRYIRLCERIGHDSRC 654 H+ + G R + C LC RY +L + + SRC Sbjct: 63 ITSPSHHKHPLKLHERIIGYRRRDQCCLC-RY-KLLDMFYNCSRC 105 >At2g38680.1 Length = 276 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/53 (26%), Positives = 29/53 (54%) Frame = -2 Query: 370 RFYIFPTSESSEQNASQNLKKVSLYHSDCNCEWHHLKQQPFLPTSQKSLMSQQ 212 +F +FPT S + +A + K+ +LY +H L+ P +P +K+ + ++ Sbjct: 32 KFQVFPTPISEQGDAYYDAKRQALYD-----HYHPLEISPVIPIDEKTKLMEE 79 >At5g05170.1 Length = 1066 Score = 28.5 bits (62), Expect = 6.5 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +1 Query: 427 PVSCSLCSETMEREVLAIHKGENCPQRIVTCEFCEFPLPAIDLLEHQEVCGNRTELCYLC 606 P +C +CS+ + + V R V C+ C FP+ E++ GN++ C C Sbjct: 17 PQTCQICSDNVGKTVDG--------DRFVACDICSFPV-CRPCYEYERKDGNQS--CPQC 65 Query: 607 -NRYIRL 624 RY RL Sbjct: 66 KTRYKRL 72 >At5g44030.1 Length = 1050 Score = 28.5 bits (62), Expect = 6.5 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +1 Query: 313 SNFDLHFAHCSRKLEKCKICGDMVPRVSAEEHFLSTHAPV--SCSLCSE 453 ++FD H S + CK+CGD V + F++ H V C C E Sbjct: 7 ASFDDEHRHSSFSAKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYE 55 >At5g16850.1 Length = 1124 Score = 28.1 bits (61), Expect = 8.5 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 8/74 (10%) Frame = +1 Query: 193 CYKNRVFVGTSGI-FVKWAKMAVASD------DATRNCS-HCDRVIPSSNFDLHFAHCSR 348 C NR+FVG +G+ FV+W + + S D TR S H SS F + + + Sbjct: 907 CSSNRMFVGDNGVPFVRWTGLLINSRTFEVQVDYTRYLSGHI-----SSTFSVAWQNKPV 961 Query: 349 KLEKCKICGDMVPR 390 + + K+C +VP+ Sbjct: 962 RNLRQKLCYFLVPK 975 >At5g63730.1 Length = 507 Score = 28.1 bits (61), Expect = 8.5 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Frame = +1 Query: 412 LSTHAPVSCS-----LCSETME--REVLAIHKGENCPQRIVTCEFCEFPLPAIDLLEHQE 570 L +H PVSC+ LCS TM+ E +++ + + VTC C L + + Sbjct: 219 LESHRPVSCNKASDWLCSATMKISDESFSLYPTKT---KTVTCPHCLCSLESDTKMPQFL 275 Query: 571 VCGNRTELCYLCNR 612 C R C C R Sbjct: 276 TCVCRLRFCSRCLR 289 >At3g46810.1 Length = 687 Score = 28.1 bits (61), Expect = 8.5 Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 7/95 (7%) Frame = +1 Query: 277 RNCSHCDRVIPSSNFDLHFAHCSRKLEKCKICGDMVPRVSAEEH-------FLSTHAPVS 435 R CS C + ++LH A+ SR CG + E H F + A Sbjct: 460 RKCSLCLQHFTGFAYNLHIAYNSRTEVMDIRCGSIFEPFVHERHPHPLYYKFFTFSAVAK 519 Query: 436 CSLCSETMEREVLAIHKGENCPQRIVTCEFCEFPL 540 C +C T + ++ CE C+F L Sbjct: 520 CDICHITR--------------RHLLCCEECDFRL 540 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,068,774 Number of Sequences: 28581 Number of extensions: 507717 Number of successful extensions: 1420 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1349 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1414 length of database: 12,141,370 effective HSP length: 100 effective length of database: 9,283,270 effective search space used: 2218701530 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At1g09920.1 (579 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g09920.1 346 5e-96 At4g15420.1 78 3e-15 At1g65120.1 31 0.42 At5g62310.1 31 0.42 At2g01620.1 30 0.72 At3g11950.1 29 1.6 At3g17580.1 29 1.6 At4g09990.1 29 2.1 At5g05170.1 28 3.6 At5g06800.1 28 3.6 At3g56640.1 28 3.6 At1g45160.1 27 6.1 At5g44030.1 27 7.9 At5g61240.1 27 7.9 >At1g09920.1 Length = 193 Score = 346 bits (888), Expect = 5e-96 Identities = 165/192 (85%), Positives = 165/192 (85%) Frame = +1 Query: 1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 180 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP Sbjct: 1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60 Query: 181 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 360 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN Sbjct: 61 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120 Query: 361 SYVRLRERYNHETKCPGTVESSRRIPRAAEXXXXXXXXXXXXXVSNKRLXXXXXXXXXXX 540 SYVRLRERYNHETKCPGTVESSRRIPRAAE VSNKRL Sbjct: 121 SYVRLRERYNHETKCPGTVESSRRIPRAAEGDGNGRRRRDGNGVSNKRLFFTIAITGIAV 180 Query: 541 XXXSLFFQRKPE 576 SLFFQRKPE Sbjct: 181 IIGSLFFQRKPE 192 >At4g15420.1 Length = 562 Score = 78.2 bits (191), Expect = 3e-15 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 31/160 (19%) Frame = +1 Query: 25 TIVCNHCDRDIPSLNIDLHRVHC--------------------ARNLEKCKICGDMVPKK 144 T+ C +C IPS +I LH V+C A+N C+ CG + Sbjct: 400 TVECRNCKHSIPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGKALQPT 459 Query: 145 HAEEHYLNTHAPIACSMCKETIEREIFDSHKGEICPKRIVTCEFC----EFPLPAVD--- 303 E+H H P+ C C +E+E H+G+ CP R++ C FC E A D Sbjct: 460 EMEKHLKVFHEPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSAADTRD 518 Query: 304 ----LAEHQEVCGNRTELCYQCNSYVRLRERYNHETKCPG 411 ++EH+ CG+RT C C V L++ H+ G Sbjct: 519 RMRGMSEHESTCGSRTAPCDSCGRSVMLKDMDIHQIAVHG 558 >At1g65120.1 Length = 1122 Score = 31.2 bits (69), Expect = 0.42 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +1 Query: 139 KKHAEEHYLNTHAPIACSMCKETIEREIFDSHKGEIC 249 +K+ E NT+A + C C+E + + DSH ++C Sbjct: 586 RKNVPEDQWNTYASLLCDKCEERLVIDAGDSHTTKLC 622 >At5g62310.1 Length = 1169 Score = 31.2 bits (69), Expect = 0.42 Identities = 18/76 (23%), Positives = 30/76 (39%) Frame = +1 Query: 100 NLEKCKICGDMVPKKHAEEHYLNTHAPIACSMCKETIEREIFDSHKGEICPKRIVTCEFC 279 N K K + PK + +E+ N H+P + F + + + C C Sbjct: 432 NTPKAKGESKIQPKVYGDENAENLHSPSGQPASADRSALWGFWADHQCVTYDNSMICRIC 491 Query: 280 EFPLPAVDLAEHQEVC 327 E +P V + EH +C Sbjct: 492 EVEIPVVHVEEHSRIC 507 >At2g01620.1 Length = 293 Score = 30.4 bits (67), Expect = 0.72 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +1 Query: 160 YLNTHAPIACSMCKETIEREIFDSHKGEICPKR----------IVTCEFCEFPLPAVDLA 309 YL++ I +C + E + S E C ++ I C C L D Sbjct: 161 YLSSEGTIDLEVCPKCDEVRMIPSCSRESCNQKQRKCRGCWLCIPRCAECAVCLVGSDTE 220 Query: 310 EHQEVCGNRTELCYQCNSYVRLRERYNHETKCPGTVESSRR 432 + CGN LC +C V + R+ ++ C T SSRR Sbjct: 221 SQEAACGNDDVLCLEC-WLVLPKCRFCNKPYC--TNHSSRR 258 >At3g11950.1 Length = 955 Score = 29.3 bits (64), Expect = 1.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 196 CKETIEREIFDSHKGEICPKRIVTCEF 276 C E+I R D H +CP ++V C F Sbjct: 227 CSESIMRRDMDRHCITVCPMKLVNCPF 253 Score = 28.9 bits (63), Expect = 2.1 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = +1 Query: 301 DLAEHQEVCGNRTELCYQ--CNSYVRLRERYNHETKCP 408 +LAEH CG RT C C + + NH++ CP Sbjct: 180 ELAEHAMNCGYRTMNCENEGCTAVFCANQMENHDSVCP 217 >At3g17580.1 Length = 81 Score = 29.3 bits (64), Expect = 1.6 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -3 Query: 295 QAMETHRTRMLQSSWGKFLLYDYRKSHVLWSLCTSSMLSEHVCS 164 QA E H RM+Q G+ + Y V+WS+ S S ++ S Sbjct: 37 QAREEHEKRMVQELQGEVMACGYDDVLVMWSILDKSNSSNNLSS 80 >At4g09990.1 Length = 291 Score = 28.9 bits (63), Expect = 2.1 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = +1 Query: 349 YQCNSYVRLRERYNHETKCPGTVESSRRIP 438 + NS +R+ Y+ ++KCP T + ++P Sbjct: 33 FSSNSTATIRDEYHQKSKCPSTPQQCTKLP 62 >At5g05170.1 Length = 1066 Score = 28.1 bits (61), Expect = 3.6 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +1 Query: 178 PIACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQC 357 P C +C + + + + R V C+ C FP+ E++ GN++ C QC Sbjct: 17 PQTCQICSDNVGKTVDGD--------RFVACDICSFPV-CRPCYEYERKDGNQS--CPQC 65 Query: 358 NS-YVRLR 378 + Y RL+ Sbjct: 66 KTRYKRLK 73 >At5g06800.1 Length = 375 Score = 28.1 bits (61), Expect = 3.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 199 CTSSMLSEHVCSSSVPQHAFWVPYHHKS 116 CT++ CSSS P + + PYHH+S Sbjct: 57 CTANQSFPVQCSSSKPYPSSFHPYHHQS 84 >At3g56640.1 Length = 790 Score = 28.1 bits (61), Expect = 3.6 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 319 EVCGNRTELCYQCNSYVRLRERYNHETKCPGTVESS 426 ++C ELC +CNSY+ + Y H K +E S Sbjct: 134 KICVQALELCVKCNSYISEGQFY-HALKTMDLIEKS 168 >At1g45160.1 Length = 1068 Score = 27.3 bits (59), Expect = 6.1 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +1 Query: 16 GEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKI-CGDM 132 G ++C C+ ++P +++ H CA +KC+I C D+ Sbjct: 396 GSDYVICRICEEEVPLFHLEPHSYICA-YADKCEINCVDV 434 >At5g44030.1 Length = 1050 Score = 26.9 bits (58), Expect = 7.9 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +1 Query: 73 DLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAPIACSMCKETIEREIFDSHKGEICP 252 D HR H + + + CK+CGD V + ++ H + +CK E E S+ + CP Sbjct: 11 DEHR-HSSFSAKICKVCGDEVKDDDNGQTFVACHVCV-YPVCKPCYEYE--RSNGNKCCP 66 Query: 253 K 255 + Sbjct: 67 Q 67 >At5g61240.1 Length = 381 Score = 26.9 bits (58), Expect = 7.9 Identities = 19/74 (25%), Positives = 37/74 (50%) Frame = +1 Query: 1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 180 + T E+ +C+H L+++++ V RNL K+ D++P + E L TH Sbjct: 148 LSTYVTEVCYLCHHNMSSFQILHLNIYSVVITRNLRWNKL-QDVIPPEIGELKRL-THLY 205 Query: 181 IACSMCKETIEREI 222 ++ + K I +E+ Sbjct: 206 LSFNSFKGEIPKEL 219 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,858,750 Number of Sequences: 28581 Number of extensions: 272348 Number of successful extensions: 772 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 737 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 764 length of database: 12,141,370 effective HSP length: 94 effective length of database: 9,454,756 effective search space used: 926566088 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)