BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= lgn_152930 (853 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g16210.1 187 5e-48 At3g07600.1 32 0.35 At5g04640.1 30 1.7 At3g19020.1 29 3.9 At1g26150.1 28 5.0 At5g27120.1 28 8.6 At2g36000.2 28 8.6 At2g36000.1 28 8.6 >At1g16210.1 Length = 235 Score = 187 bits (476), Expect = 5e-48 Identities = 100/228 (43%), Positives = 116/228 (50%) Frame = +3 Query: 78 MPKKMGVNSKAETSRARKNAVXXXXXXXXXXXXXXQYWXXXXXXXXXXXXXXXXXXXXXX 257 MPKKMG+NSKAE +++RKNA QYW Sbjct: 1 MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKA 60 Query: 258 XXXXXXXXXXXXXXXXXXXXXXSIKKPDKKANRVSAPVPKVTEAELXXXXXXXXXXXXXX 437 ++KKPDKKANRV+ PVPKVTEAEL Sbjct: 61 ETAAKKLEAKRLAEQEEKELEKALKKPDKKANRVTVPVPKVTEAELIRRREEDQVALAKK 120 Query: 438 XXXXXXXQSRMAAEEEYEKMVLVTNRNRDDSIIEASTVDDAIAHLAISDSLPPDRHPXXX 617 Q+RMA E+EYEKMVLVTN NRDDS+IEA TVD+A+A + +SD+LP DRHP Sbjct: 121 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR 180 Query: 618 XXXXXXXXXXXXXXXXXXXXPGLTHTQYKDLIWKLWKKSPDNPLNQVA 761 PGLTHTQYKDLIWK+WKKSPDNPLNQ A Sbjct: 181 LKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQAA 228 >At3g07600.1 Length = 158 Score = 32.3 bits (72), Expect = 0.35 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +1 Query: 160 VNPEKKKTSIGARLKEPSHAPPRNVKKKPRSEQRPQQRKP 279 +N +KK + + PP++ KKP E++P+++KP Sbjct: 56 INTLRKKVAFAELVSVAKVEPPKDGDKKPEEEKKPEEKKP 95 >At5g04640.1 Length = 323 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 459 QSRMAAEEEYEKMVLVTNRNRDDSIIEASTVDDAIAHLAISD 584 Q+ ++A E E LV ++N D+ I S +DD L ISD Sbjct: 197 QNPVSASETVEDRELVVHKNMDEDNIHVSDMDDKDTMLMISD 238 >At3g19020.1 Length = 957 Score = 28.9 bits (63), Expect = 3.9 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +1 Query: 121 GLGRTPSNRSAKTVN-PEKKKTSIGARLKEPSHAPPRNVKKKPRSEQRPQQRKPR 282 G G PS + T PE KK L+EPS K KP +PQQ P+ Sbjct: 402 GGGSNPSPKPTPTPKAPEPKKEINPPNLEEPS-------KPKPEESPKPQQPSPK 449 >At1g26150.1 Length = 761 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 196 RLKEPSHAPPRNVKKKPRSEQRPQQR 273 +L PSH+PPR++ P SE P R Sbjct: 171 KLVPPSHSPPRHLPSPPASEIPPPPR 196 >At5g27120.1 Length = 534 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Frame = +1 Query: 130 RTPSNRSAKTVNPEKKKTSIGARLKEPSHA--PPRNVKKKPRSEQRPQQRKP 279 + AKT P KKK++ EP A P + KKK R + + P Sbjct: 465 KADDEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKEKKKKRKHEEEETEMP 516 >At2g36000.2 Length = 319 Score = 27.7 bits (60), Expect = 8.6 Identities = 18/40 (45%), Positives = 24/40 (60%) Frame = -3 Query: 851 DHQHIPTTAHLSQLIGLLQPHQHKVYL*LICDLVKRIIWR 732 DHQ PT L Q IG+L PH+H YL L C + +++ R Sbjct: 178 DHQLRPTLYFL-QRIGILDPHKH-TYL-LSCSVDNKLVPR 214 >At2g36000.1 Length = 334 Score = 27.7 bits (60), Expect = 8.6 Identities = 18/40 (45%), Positives = 24/40 (60%) Frame = -3 Query: 851 DHQHIPTTAHLSQLIGLLQPHQHKVYL*LICDLVKRIIWR 732 DHQ PT L Q IG+L PH+H YL L C + +++ R Sbjct: 178 DHQLRPTLYFL-QRIGILDPHKH-TYL-LSCSVDNKLVPR 214 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,727,009 Number of Sequences: 28581 Number of extensions: 248329 Number of successful extensions: 793 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 788 length of database: 12,141,370 effective HSP length: 99 effective length of database: 9,311,851 effective search space used: 1713380584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= stgn_177106 (1179 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g16210.1 192 4e-49 At5g04640.1 30 2.7 At2g20960.1 29 4.6 At1g17210.1 29 4.6 At1g46696.1 28 7.9 >At1g16210.1 Length = 235 Score = 192 bits (487), Expect = 4e-49 Identities = 102/228 (44%), Positives = 117/228 (51%) Frame = +1 Query: 94 MPKKMGVNSKAETSRARKNAVXXXXXXXXXXXXXXQYWXXXXXXXXXXXXXXXXXXXXXX 273 MPKKMG+NSKAE +++RKNA QYW Sbjct: 1 MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKA 60 Query: 274 XXXXXXXXXXXXXXXXXXXXXXSIKKPDKKANRVAAPVPKVTEAELXXXXXXXXXXXXXX 453 ++KKPDKKANRV PVPKVTEAEL Sbjct: 61 ETAAKKLEAKRLAEQEEKELEKALKKPDKKANRVTVPVPKVTEAELIRRREEDQVALAKK 120 Query: 454 XXXXXXXQSRMAAEEEYEKMVLVTNRNRDDSIIEASTVDDAIAHLAISDSLPPDRHPEKX 633 Q+RMA E+EYEKMVLVTN NRDDS+IEA TVD+A+A + +SD+LP DRHPEK Sbjct: 121 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR 180 Query: 634 XXXXXXXXXXXXXXXXXXXXPGLTHTQYKDLIWKLWKKSPDNPLNQVA 777 PGLTHTQYKDLIWK+WKKSPDNPLNQ A Sbjct: 181 LKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQAA 228 >At5g04640.1 Length = 323 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +1 Query: 475 QSRMAAEEEYEKMVLVTNRNRDDSIIEASTVDDAIAHLAISD 600 Q+ ++A E E LV ++N D+ I S +DD L ISD Sbjct: 197 QNPVSASETVEDRELVVHKNMDEDNIHVSDMDDKDTMLMISD 238 >At2g20960.1 Length = 749 Score = 29.3 bits (64), Expect = 4.6 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 10/56 (17%) Frame = +2 Query: 146 RTPSNRSA----------KTVNPEKKKNSIGARPKEPSHAPPRNVKKKPRSEQRPQ 283 RTP +RSA + PE++ N+ RP+ P H ++ E RP+ Sbjct: 169 RTPQHRSAHQEDAFSLETRPRTPERRSNTSDTRPRTPIHESAATGRRPQTPETRPR 224 >At1g17210.1 Length = 959 Score = 29.3 bits (64), Expect = 4.6 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +2 Query: 164 SAKTVNPEKKKNSIGARPKEPSHAPPRNVKKKPRSEQRPQQRKSRCVG 307 S++ VNP +NS+ + S P +++ RS PQ + G Sbjct: 7 SSQNVNPRSNRNSVASASASASATPVDRFRRRARSPSPPQTAAASSAG 54 >At1g46696.1 Length = 617 Score = 28.5 bits (62), Expect = 7.9 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 7/55 (12%) Frame = +2 Query: 149 TPSNRSAKTV------NPEKKK-NSIGARPKEPSHAPPRNVKKKPRSEQRPQQRK 292 TP++ S K + +PEK+ + +P+E SH+PPR+ +PR E++ + K Sbjct: 241 TPTSGSGKALKDPAGKDPEKRAADKKRKQPEEISHSPPRS--SRPRQEEKGAKLK 293 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,295,052 Number of Sequences: 28581 Number of extensions: 386602 Number of successful extensions: 1247 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1242 length of database: 12,141,370 effective HSP length: 102 effective length of database: 9,226,108 effective search space used: 2675571320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cangn_196844 (1024 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g16210.1 188 4e-48 At1g23420.1 35 0.092 At5g04640.1 30 2.3 At1g66650.1 29 3.8 At1g09575.1 29 3.8 At4g39840.1 29 5.0 At5g37890.1 28 6.6 At2g25940.1 28 6.6 At5g63320.1 28 6.6 At5g37930.1 28 8.6 At5g14420.2 28 8.6 At5g14420.1 28 8.6 >At1g16210.1 Length = 235 Score = 188 bits (478), Expect = 4e-48 Identities = 102/228 (44%), Positives = 115/228 (50%) Frame = +3 Query: 57 MPKKMGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXQYWXXXXXXXXXXXXXXXXXXXXXX 236 MPKKMG+N QYW Sbjct: 1 MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKA 60 Query: 237 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVGVPVPKVTEAELXXXXXXXXXXXXXX 416 NRV VPVPKVTEAEL Sbjct: 61 ETAAKKLEAKRLAEQEEKELEKALKKPDKKANRVTVPVPKVTEAELIRRREEDQVALAKK 120 Query: 417 XXXXXXXQSRMAAEEEYEKMVLVTNRNRDDSIIEASTVDDAIAHLAISDSLPPDRHPEKR 596 Q+RMA E+EYEKMVLVTN NRDDS+IEA TVD+A+A + +SD+LP DRHPEKR Sbjct: 121 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR 180 Query: 597 LRAAFKAFEEAELRTLKEEKPGLTHTQYKDLIWKLWKKSPDNPLNQIA 740 L+A+FKA+EE EL LK EKPGLTHTQYKDLIWK+WKKSPDNPLNQ A Sbjct: 181 LKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQAA 228 >At1g23420.1 Length = 232 Score = 34.7 bits (78), Expect = 0.092 Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Frame = +3 Query: 438 QSRMAAEEEYEKMVLVTNRNRDDS----IIEASTVDDAIAHLAISDSLPPDRHPEKRLRA 605 + +AA + E+ N+ +++S + + D+ ++ + + PP++ +R + Sbjct: 83 KEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKR--QRAPS 140 Query: 606 AFKAFEEAELRTLKEEKPGLTHTQYKDLIWKLWKKSP 716 A+ F + E+R LK + P + H + L K W P Sbjct: 141 AYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFP 177 >At5g04640.1 Length = 323 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 438 QSRMAAEEEYEKMVLVTNRNRDDSIIEASTVDDAIAHLAISD 563 Q+ ++A E E LV ++N D+ I S +DD L ISD Sbjct: 197 QNPVSASETVEDRELVVHKNMDEDNIHVSDMDDKDTMLMISD 238 >At1g66650.1 Length = 330 Score = 29.3 bits (64), Expect = 3.8 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +1 Query: 736 LQINHRCTFCNSPIG*ERCCCAGDMLMVHSVTCLVSTVFCQR 861 +++ RC+FC PIG RC ++ V+C + C++ Sbjct: 112 IKLKKRCSFCKLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQ 153 >At1g09575.1 Length = 293 Score = 29.3 bits (64), Expect = 3.8 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 16/84 (19%) Frame = +3 Query: 492 RNRDDSIIEASTVDDAIAHLAISD---------------SLPPDRHPEK-RLRAAFKAFE 623 R+ D++ + A +DDA L D ++P D++PE+ +++ F Sbjct: 96 RSPDEAHVFARVLDDAGVVLIFRDKVYLHPDKVVDLIRRAMPLDQNPEEDQIKEEFN--- 152 Query: 624 EAELRTLKEEKPGLTHTQYKDLIW 695 +LR +KEE L H Q + ++W Sbjct: 153 --KLRIMKEEIDVLAHRQVRKILW 174 >At4g39840.1 Length = 452 Score = 28.9 bits (63), Expect = 5.0 Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 11/108 (10%) Frame = -2 Query: 903 LKTRSNMLKAHPKTSLAEDCRHQTGHAMYHQHIPSAATPFSADRTIAKSAPMIYLQSG*E 724 LK S+ +T LA+ T H + S+ T S+ + L SG + Sbjct: 98 LKPISSSSSTKNQTKLAKTTTMGTSHKLNSTK--------SSSNTTKTSSELKKLNSGTK 149 Query: 723 DYPEISSIASKSSLCTECASD-----------LVSPPSEYEAQPPQKP 613 SSI + L +S L SPPSE ++QP KP Sbjct: 150 STNSTSSIKKSADLSKSSSSKNKTTIKPPSSKLSSPPSEKKSQPSSKP 197 >At5g37890.1 Length = 287 Score = 28.5 bits (62), Expect = 6.6 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +1 Query: 739 QINHRCTFCNSPIG*ERCCCAGDMLMVHSVTCLVSTVFCQR 861 ++N++C C SP+G RC +L + C + + C++ Sbjct: 78 KLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKK 118 >At2g25940.1 Length = 479 Score = 28.5 bits (62), Expect = 6.6 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -2 Query: 741 LQSG*EDYPEISSIASKSSLCTECASDLVSPPSEYE 634 L G Y +S A +SS T C + SPPSEYE Sbjct: 214 LPEGLNIYATTASNAEESSWGTYCPGEDPSPPSEYE 249 >At5g63320.1 Length = 570 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 5/42 (11%) Frame = +3 Query: 501 DDSIIEASTVDDAIAHLAISDSLPPDRH-----PEKRLRAAF 611 + ++ E ST DA+ + ++ PP+R P+KR RAAF Sbjct: 30 EHTVGEKSTTMDAVVLVPDEETAPPERQISPDSPDKRYRAAF 71 >At5g37930.1 Length = 350 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +1 Query: 739 QINHRCTFCNSPIG*ERCCCAGDMLMVHSVTCLVSTVFCQ 858 ++ +RC C PIG RC ++ V+CL + C+ Sbjct: 140 KVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCK 179 >At5g14420.2 Length = 469 Score = 28.1 bits (61), Expect = 8.6 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 717 PEISSIASKSSLCTECASDLVSPPSEYEAQPPQKP*RLP*VSSQDAYPAANYLK*PSEQW 538 P SS AS+ S A PP AQPP+ P + S Y A +Y PS+ + Sbjct: 25 PSSSSWASQQSYPQYGAESYNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSY 84 >At5g14420.1 Length = 469 Score = 28.1 bits (61), Expect = 8.6 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 717 PEISSIASKSSLCTECASDLVSPPSEYEAQPPQKP*RLP*VSSQDAYPAANYLK*PSEQW 538 P SS AS+ S A PP AQPP+ P + S Y A +Y PS+ + Sbjct: 25 PSSSSWASQQSYPQYGAESYNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSY 84 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,699,968 Number of Sequences: 28581 Number of extensions: 333208 Number of successful extensions: 925 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 881 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 923 length of database: 12,141,370 effective HSP length: 100 effective length of database: 9,283,270 effective search space used: 2227984800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_123394 (995 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g16210.1 183 2e-46 At1g23420.1 32 0.75 At4g00180.1 31 0.97 At2g45190.1 31 0.97 At2g26580.2 30 2.8 At2g26580.1 30 2.8 At3g24210.1 28 8.3 >At1g16210.1 Length = 235 Score = 183 bits (464), Expect = 2e-46 Identities = 94/225 (41%), Positives = 113/225 (50%) Frame = +1 Query: 1 KMGVNXXXXXXXXXXXXXXXDRKDREARDKEEQYWRDXXXXXXXXXXXXXXXXXXXXXXX 180 KMG+N ++KDR+ R+KEEQYWR+ Sbjct: 4 KMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKAETA 63 Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVSVPVPKVTXXXXXXXXXXXXXXXXXXXXX 360 NRV+VPVPKVT Sbjct: 64 AKKLEAKRLAEQEEKELEKALKKPDKKANRVTVPVPKVTEAELIRRREEDQVALAKKAED 123 Query: 361 XXXXNSRTAAEEEYERMVLVENTNRDDXXXXXXXXXXXXXQMTVADNLPVDKHPERRLKA 540 +R A E+EYE+MVLV NTNRDD ++TV+DNLPVD+HPE+RLKA Sbjct: 124 SKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKRLKA 183 Query: 541 SFKAFEEAELPRLKEDKPGLTHTQYKDMIWKLWKKSPDNPLNQVA 675 SFKA+EE ELPRLK +KPGLTHTQYKD+IWK+WKKSPDNPLNQ A Sbjct: 184 SFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQAA 228 >At1g23420.1 Length = 232 Score = 31.6 bits (70), Expect = 0.75 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +1 Query: 508 VDKHPERRLKA--SFKAFEEAELPRLKEDKPGLTHTQYKDMIWKLWKKSP 651 V+K PE+R +A ++ F + E+ RLK P + H + + K W P Sbjct: 128 VNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFP 177 >At4g00180.1 Length = 241 Score = 31.2 bits (69), Expect = 0.97 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +1 Query: 505 PVDKHPERRLK--ASFKAFEEAELPRLKEDKPGLTHTQYKDMIWKLWKKSPDNPLNQVAD 678 P ++ PE+R + +++ F + E+ R+K P ++H + K W P +AD Sbjct: 145 PANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMAD 204 Query: 679 MP 684 P Sbjct: 205 HP 206 >At2g45190.1 Length = 230 Score = 31.2 bits (69), Expect = 0.97 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 3/89 (3%) Frame = +1 Query: 505 PVDKHPERRLK--ASFKAFEEAELPRLKEDKPGLTHTQYKDMIWKLWKKSPDNPLNQVAD 678 PV++ PE+R + +++ F + E+ R+K P ++H + K W P V D Sbjct: 133 PVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPD 192 Query: 679 -MP*ECIAAEKQVDILNVVFCKGFCSACA 762 P + +Q N+V +GF + A Sbjct: 193 NQPVKKTNMPQQEGEDNMVMKEGFYAPAA 221 >At2g26580.2 Length = 165 Score = 29.6 bits (65), Expect = 2.8 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Frame = +1 Query: 487 TVADNLPVDKHPERRLK--ASFKAFEEAELPRLKEDKPGLTHTQYKDMIWKLWKKSP 651 T+ + V++ PE+R + +++ F + E+ R+K + P ++H + K W P Sbjct: 91 TITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFP 147 >At2g26580.1 Length = 165 Score = 29.6 bits (65), Expect = 2.8 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Frame = +1 Query: 487 TVADNLPVDKHPERRLK--ASFKAFEEAELPRLKEDKPGLTHTQYKDMIWKLWKKSP 651 T+ + V++ PE+R + +++ F + E+ R+K + P ++H + K W P Sbjct: 91 TITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFP 147 >At3g24210.1 Length = 608 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +3 Query: 726 CRLLQRVLQCMCKME--YIIPAESVSLHFCNTMCSFLFVSVQSDFKKQWCY**NLEREMR 899 CR L R++ M KM+ Y+ +S HF +++ F+ SD K W NL +M Sbjct: 135 CRRLPRLIATMSKMKDFYL----EMSFHFESSVVPFVSKVAPSDTYKVWKVGSNLRADMT 190 Query: 900 IA 905 +A Sbjct: 191 MA 192 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,116,135 Number of Sequences: 28581 Number of extensions: 310421 Number of successful extensions: 1368 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 997 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1339 length of database: 12,141,370 effective HSP length: 100 effective length of database: 9,283,270 effective search space used: 2144435370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At1g16210.1 (705 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g16210.1 349 1e-96 At4g23800.1 35 0.040 At1g23420.1 35 0.053 At3g59410.1 33 0.12 At2g27350.2 32 0.26 At2g27350.1 32 0.26 At2g26580.2 32 0.26 At2g26580.1 32 0.26 At2g45190.1 31 0.58 At2g18540.1 30 1.00 At5g38500.1 30 1.3 At5g42490.1 30 1.7 At4g00180.1 30 1.7 At1g62680.1 29 2.2 At3g59870.1 29 2.9 At2g42920.1 29 2.9 At1g55250.1 28 3.8 At1g69180.1 28 4.9 At3g04240.1 28 4.9 At2g31030.1 28 4.9 At4g10320.1 28 4.9 At2g12875.1 28 4.9 At2g19490.1 28 4.9 At2g17560.1 27 8.4 At4g02940.1 27 8.4 >At1g16210.1 Length = 235 Score = 349 bits (895), Expect = 1e-96 Identities = 181/234 (77%), Positives = 181/234 (77%) Frame = +1 Query: 1 MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPXXXXXXXXXXXXXXXX 180 MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGP Sbjct: 1 MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKA 60 Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVTVPVPKVTEAELIRRREEDQVALAKK 360 NRVTVPVPKVTEAELIRRREEDQVALAKK Sbjct: 61 ETAAKKLEAKRLAEQEEKELEKALKKPDKKANRVTVPVPKVTEAELIRRREEDQVALAKK 120 Query: 361 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR 540 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR Sbjct: 121 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR 180 Query: 541 LKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQXXXXXXNE 702 LKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQ NE Sbjct: 181 LKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQAAAAAANE 234 >At4g23800.1 Length = 457 Score = 35.0 bits (79), Expect = 0.040 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 18/145 (12%) Frame = +1 Query: 274 NRVTVPVPKVTEAELIRRREEDQVALAKKAEDSKKKQTRMAGEDEYEKMV---LVTNTNR 444 N+ V V K+T E ++ + K A+ K K+T + +EY++ ++ Sbjct: 277 NKSVVEVAKITGEEWKNLSDKKKAPYEKVAK--KNKETYLQAMEEYKRTKEEEALSQKKE 334 Query: 445 DDSLIEAHTVD--EALARITVSDNL-------------PVDRHPEKRLKASFKAYEEVEL 579 ++ L++ H + + L + +DNL VD + K+ +S+ + + E Sbjct: 335 EEELLKLHKQEALQMLKKKEKTDNLIKKEKATKKKKNENVDPNKPKKPASSYFLFSKDER 394 Query: 580 PRLKSEKPGLTHTQYKDLIWKMWKK 654 +L E+PG + LI WK+ Sbjct: 395 KKLTEERPGTNNATVTALISLKWKE 419 >At1g23420.1 Length = 232 Score = 34.7 bits (78), Expect = 0.053 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 6/110 (5%) Frame = +1 Query: 349 LAKKAEDSKKKQTRMAGEDEYEKMVLVTNTNRDDS----LIEAHTVDEALARITVSDNLP 516 LA + + + +A D E+ N +++S + + DE ++R+ N P Sbjct: 72 LASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKP 131 Query: 517 VDRHPEKRLKA--SFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSP 660 PEKR +A ++ + + E+ RLK++ P + H + L K W P Sbjct: 132 ----PEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFP 177 >At3g59410.1 Length = 1242 Score = 33.5 bits (75), Expect = 0.12 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +2 Query: 254 KSQTRRRIASLCRFLRSQRLSSSEDARKIKWLWLRKQ 364 K++ RR++A L + S R SSE RK+KW+++R+Q Sbjct: 944 KAEHRRKVAELLSMMGSLRPQSSE--RKLKWVFIRRQ 978 >At2g27350.2 Length = 506 Score = 32.3 bits (72), Expect = 0.26 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 5/89 (5%) Frame = +1 Query: 286 VPVPKVTEAELIRRREEDQVALAKKAEDSKKKQTRM-----AGEDEYEKMVLVTNTNRDD 450 +PVP VT E I ++++V + +KAE S K + A ++ E +V+ N + Sbjct: 38 IPVPPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQS 97 Query: 451 SLIEAHTVDEALARITVSDNLPVDRHPEK 537 I+ D ++ + SD+ PV P K Sbjct: 98 EGIDC---DSPVSGGSNSDSPPVPAPPPK 123 >At2g27350.1 Length = 506 Score = 32.3 bits (72), Expect = 0.26 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 5/89 (5%) Frame = +1 Query: 286 VPVPKVTEAELIRRREEDQVALAKKAEDSKKKQTRM-----AGEDEYEKMVLVTNTNRDD 450 +PVP VT E I ++++V + +KAE S K + A ++ E +V+ N + Sbjct: 38 IPVPPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQS 97 Query: 451 SLIEAHTVDEALARITVSDNLPVDRHPEK 537 I+ D ++ + SD+ PV P K Sbjct: 98 EGIDC---DSPVSGGSNSDSPPVPAPPPK 123 >At2g26580.2 Length = 165 Score = 32.3 bits (72), Expect = 0.26 Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +1 Query: 463 AHT-VDEALARITVSDNLPVDRHPEKRLK--ASFKAYEEVELPRLKSEKPGLTHTQYKDL 633 +HT + ++ T+++ V+R PEKR + +++ + + E+ R+K+ P ++H + Sbjct: 79 SHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFST 138 Query: 634 IWKMWKKSP 660 K W P Sbjct: 139 AAKNWAHFP 147 >At2g26580.1 Length = 165 Score = 32.3 bits (72), Expect = 0.26 Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +1 Query: 463 AHT-VDEALARITVSDNLPVDRHPEKRLK--ASFKAYEEVELPRLKSEKPGLTHTQYKDL 633 +HT + ++ T+++ V+R PEKR + +++ + + E+ R+K+ P ++H + Sbjct: 79 SHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFST 138 Query: 634 IWKMWKKSP 660 K W P Sbjct: 139 AAKNWAHFP 147 >At2g45190.1 Length = 230 Score = 31.2 bits (69), Expect = 0.58 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 514 PVDRHPEKRLK--ASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSP 660 PV+R PEKR + +++ + + E+ R+K+ P ++H + K W P Sbjct: 133 PVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFP 183 >At2g18540.1 Length = 700 Score = 30.4 bits (67), Expect = 1.00 Identities = 23/98 (23%), Positives = 42/98 (42%) Frame = +1 Query: 307 EAELIRRREEDQVALAKKAEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEAL 486 E E +RREE+++ +K E+ +K+ +E E R++ E +E Sbjct: 423 EIEERKRREEEEIERRRKEEEEARKREEAKRREEEEA------KRREEEETERKKREEEE 476 Query: 487 ARITVSDNLPVDRHPEKRLKASFKAYEEVELPRLKSEK 600 AR + + ++R + K EE E R + E+ Sbjct: 477 ARKREEERKREEEEAKRREEERKKREEEAEQARKREEE 514 Score = 27.3 bits (59), Expect = 8.4 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%) Frame = +1 Query: 307 EAELIRRREEDQVALAKKAEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEAL 486 E E RR EE+ ++ E+++K++ E+E K R++ +A +E Sbjct: 456 EEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEER 515 Query: 487 AR-ITVSDNLPVDRHPEKRLKASFKAYEEVELPRLKSE 597 + ++ +R ++R + K EE E R + E Sbjct: 516 EKEEEMAKKREEERQRKEREEVERKRREEQERKRREEE 553 >At5g38500.1 Length = 412 Score = 30.0 bits (66), Expect = 1.3 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Frame = +1 Query: 301 VTEAELIRRREEDQVA--LAKKAEDSKKKQTRMAGEDEYEKMVLV-TNTNRDDSLIEAHT 471 + E ++ EE+Q LA+K EDSK ++ ++ ED+ EK L + SL++ Sbjct: 14 LAETVVMAAEEEEQRRRLLAEKREDSKSQKKTVSEEDDSEKRFLSHVPRKKRSSLVKRQQ 73 Query: 472 VDEALARITVS----DNLPVDRHPEKRLKASF 555 ++ + S + +P+D E + SF Sbjct: 74 KPNGVSTSSSSLPDLNQIPIDYETETKQNPSF 105 >At5g42490.1 Length = 1088 Score = 29.6 bits (65), Expect = 1.7 Identities = 26/103 (25%), Positives = 42/103 (40%) Frame = +1 Query: 313 ELIRRREEDQVALAKKAEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALAR 492 E + EED L +D + +R D++E++V +T+ +D+ E + E A Sbjct: 339 EFLENSEEDDFLL----DDKTPQFSRHNLYDDWEELVQITDERLEDACKEVRCI-EPEAE 393 Query: 493 ITVSDNLPVDRHPEKRLKASFKAYEEVELPRLKSEKPGLTHTQ 621 + + H A EV PR + PGL H Q Sbjct: 394 QSSGQPAACESHDSLDDIVDKIAISEVLSPRKEETLPGLEHEQ 436 >At4g00180.1 Length = 241 Score = 29.6 bits (65), Expect = 1.7 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +1 Query: 514 PVDRHPEKRLK--ASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSP 660 P +R PEKR + +++ + + E+ R+K+ P ++H + K W P Sbjct: 145 PANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFP 195 >At1g62680.1 Length = 543 Score = 29.3 bits (64), Expect = 2.2 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 555 KRSLEPLLRVSINGQVI*HSNPCKSLVNGMCLDERI 448 K E ++R+SI+ ++ +S SL+NG+CL +RI Sbjct: 274 KELFEEMVRMSIDPDIVTYS----SLINGLCLHDRI 305 >At3g59870.1 Length = 289 Score = 28.9 bits (63), Expect = 2.9 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -2 Query: 491 RARASSTVCASMRESSRLVLVTRTIFSYSSSPAMRVCF 378 R +SST C+S +S +L V R S SSSP++ +CF Sbjct: 33 RRSSSSTSCSSQSQSFQLFSVRRRR-SRSSSPSIPMCF 69 >At2g42920.1 Length = 560 Score = 28.9 bits (63), Expect = 2.9 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 14/76 (18%) Frame = -2 Query: 554 KEALSLFSGCRSTGRLSDTVIRARASSTVCASMRESSRLVLVTRTI-------------- 417 +E + + TG +SDTV +R + CAS + + LV I Sbjct: 39 RELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRG 98 Query: 416 FSYSSSPAMRVCFFLE 369 FS SS P M + F++ Sbjct: 99 FSRSSFPEMAISIFID 114 >At1g55250.1 Length = 523 Score = 28.5 bits (62), Expect = 3.8 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = +1 Query: 373 KKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKRLKAS 552 K + + E E + L+T + D+ E H A+A ++S PVD+ + LK S Sbjct: 273 KGQLEEIKAELEENRRKLITLKMQKDAACEGHVTSPAIANGSLSPEKPVDKTKLRELKDS 332 >At1g69180.1 Length = 182 Score = 28.1 bits (61), Expect = 4.9 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = +1 Query: 517 VDRHPEK--RLKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKK-SPDNP 669 V + PEK RL +++ + E+ R+KS P + H + K W K P++P Sbjct: 108 VVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSP 161 >At3g04240.1 Length = 978 Score = 28.1 bits (61), Expect = 4.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +2 Query: 503 QITCPLIDTRRRGSRLLLRHMKKWNFQGSSLRNQ 604 ++TCPL DT R L + K WN S + Q Sbjct: 929 RLTCPLFDTMRWVKNLERSYFKMWNLHCSGQQPQ 962 >At2g31030.1 Length = 490 Score = 28.1 bits (61), Expect = 4.9 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +1 Query: 28 KAEVAKSRKNAAEAEQKDRQTREKEEQYWR 117 K E + EQ+ RQ REK+E+ W+ Sbjct: 421 KGEFEMGNREKLRLEQRQRQAREKQERGWK 450 >At4g10320.1 Length = 1191 Score = 28.1 bits (61), Expect = 4.9 Identities = 16/60 (26%), Positives = 33/60 (55%) Frame = +1 Query: 316 LIRRREEDQVALAKKAEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARI 495 L++ + V + K+ +D K+ + AG+ + ++++ + DDSL+EA E + RI Sbjct: 964 LLKETDIKIVRVFKRPDDLKENEIDSAGDGD---VLVILDLRADDSLVEAGFAREIVNRI 1020 >At2g12875.1 Length = 326 Score = 28.1 bits (61), Expect = 4.9 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 19 LNSKAEVAKSRKNAAEAEQKDRQTREKEEQ 108 LN E KS KN E +KD + + +EE+ Sbjct: 9 LNPVLEAEKSHKNEEEKSEKDEEEKSEEEE 38 >At2g19490.1 Length = 377 Score = 28.1 bits (61), Expect = 4.9 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Frame = +1 Query: 319 IRRREEDQVALAKK------AEDSKKKQTRMAGEDEYEKMVLVTNTNRDD 450 +++ E DQ L KK A+++ K+T E+E V+V+ N DD Sbjct: 310 LKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDD 359 >At2g17560.1 Length = 139 Score = 27.3 bits (59), Expect = 8.4 Identities = 21/79 (26%), Positives = 31/79 (39%) Frame = +1 Query: 274 NRVTVPVPKVTEAELIRRREEDQVALAKKAEDSKKKQTRMAGEDEYEKMVLVTNTNRDDS 453 N+ V K A +ED+ KAE K + + + K+ TN DDS Sbjct: 60 NKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNL-KLASGTNREEDDS 118 Query: 454 LIEAHTVDEALARITVSDN 510 VDEA++ D+ Sbjct: 119 DKSKSEVDEAVSEEEAEDD 137 >At4g02940.1 Length = 570 Score = 27.3 bits (59), Expect = 8.4 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +1 Query: 334 EDQVALAKKAEDSKKKQTRMAGEDEYEKMV 423 E Q AKKAED K+K+T E++ +++V Sbjct: 116 ELQKVAAKKAEDLKQKKTEEEAEEDLKEVV 145 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.310 0.127 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,547,889 Number of Sequences: 28581 Number of extensions: 212431 Number of successful extensions: 876 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 760 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 868 length of database: 12,141,370 effective HSP length: 97 effective length of database: 9,369,013 effective search space used: 1283554781 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)