BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= lgn_153866 (760 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g30825.1 164 5e-41 At2g33385.1 60 8e-18 At1g30120.1 28 5.6 At5g04170.1 28 7.3 At1g72670.1 27 9.5 At2g34590.1 27 9.5 >At1g30825.1 Length = 319 Score = 164 bits (415), Expect = 5e-41 Identities = 87/150 (58%), Positives = 104/150 (69%) Frame = +3 Query: 135 MILLQSPSRYLLQILYNRVQSLEKGVELDSQWVEFDDIRYHIQGSVKXXXXXXXXXXXXX 314 MILLQS SR+LLQ L R Q+L+K VELD QW+EFDD+RYH+Q ++K Sbjct: 1 MILLQSHSRFLLQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPN 60 Query: 315 XXXETVLFGGLPLGALEAIKAAYGAVAQILDPPRDGFNLTLKLNLSKLPPDEEQKHALLT 494 E + F GLPLGA+EAIK YG QILDPPRDGF+LTLKLN SK+ PDEE LLT Sbjct: 61 PPPEAMSFDGLPLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKVRPDEE----LLT 116 Query: 495 KIASVREVVMGAPLTAVLTQLVTRTVPSDL 584 K+AS+REVVMGAPL + L +RTV +L Sbjct: 117 KLASIREVVMGAPLKIIFKHLASRTVAPEL 146 Score = 83.6 bits (205), Expect = 1e-16 Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 5/93 (5%) Frame = +2 Query: 488 PDKDCIREGGSNGSPTDGSSDTTCYKDSSFRSSKP-----VALDHRPNESFFLVPQADDV 652 PD++ + + S G+ +K + R+ P VA+ HRPNE+FFLVPQAD V Sbjct: 110 PDEELLTKLASIREVVMGAPLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKV 169 Query: 653 TVIFPMRINDSIDTVLATSFLQECVDARRTAGL 751 TV FPMR DS+DT+LATSFL+E V+ARR A L Sbjct: 170 TVAFPMRFKDSVDTILATSFLKEFVEARRAAAL 202 >At2g33385.1 Length = 366 Score = 60.1 bits (144), Expect(2) = 8e-18 Identities = 42/141 (29%), Positives = 65/141 (46%) Frame = +3 Query: 135 MILLQSPSRYLLQILYNRVQSLEKGVELDSQWVEFDDIRYHIQGSVKXXXXXXXXXXXXX 314 M L+ S L + L ++ EK +E+D + EF I YHI+ SV Sbjct: 1 MAYLERASPTLKETLL-KIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLL 59 Query: 315 XXXETVLFGGLPLGALEAIKAAYGAVAQILDPPRDGFNLTLKLNLSKLPPDEEQKHALLT 494 V + E IK V I+DPPR GF LTL LNL +P +E ++T Sbjct: 60 ETQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKE-AIKIIT 118 Query: 495 KIASVREVVMGAPLTAVLTQL 557 +I+ ++ +++ + L +L L Sbjct: 119 RISELQAIILSSQLKEMLRSL 139 Score = 47.8 bits (112), Expect(2) = 8e-18 Identities = 19/52 (36%), Positives = 33/52 (63%) Frame = +2 Query: 566 DSSFRSSKPVALDHRPNESFFLVPQADDVTVIFPMRINDSIDTVLATSFLQE 721 DS ++ P+ + + P+E F++ Q + +T +FPM D+ D V+ATSF Q+ Sbjct: 144 DSRSINNMPIRIVYHPSEPFYVFKQPEKITAVFPMNFKDNSDVVIATSFFQD 195 >At1g30120.1 Length = 407 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/56 (23%), Positives = 31/56 (55%) Frame = -1 Query: 670 HRKYDGHIVCLRYKEKRLIRTMIQGNGLARSEGTVLVTSCVRTAVSGAPITTSLTD 503 ++ YD ++ +R + + T+ GN + ++ ++V C+RT GA +T ++ + Sbjct: 307 NKGYDPEVIDIRSLKPFDLHTI--GNSVKKTHRVLIVEECMRTGGIGASLTAAINE 360 >At5g04170.1 Length = 355 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -1 Query: 421 PSLGGSRICATAPYAAFMASSAPSGSPPKRTVSGGGMG 308 P+ G S A P A + S PPK GGG G Sbjct: 63 PTYGSSSYGAPPPSAPYAPSPGDYNKPPKEKPYGGGYG 100 >At1g72670.1 Length = 415 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 512 GGSNGSPTDGSSDTTCYKDSSFRSSKPVALDHRPNESFFLV 634 GGS G+P+ GS + D SF ++ A+ P + FFLV Sbjct: 51 GGSYGTPSLGSDPPSFSADDSF-TAAVAAVIRAPPKDFFLV 90 >At2g34590.1 Length = 407 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/56 (23%), Positives = 31/56 (55%) Frame = -1 Query: 670 HRKYDGHIVCLRYKEKRLIRTMIQGNGLARSEGTVLVTSCVRTAVSGAPITTSLTD 503 ++ YD ++ +R + + T+ GN + ++ ++V C+RT GA +T ++ + Sbjct: 307 NKGYDPEVIDIRSLKPFDLYTI--GNSVKKTHRVLIVEECMRTGGIGASLTAAINE 360 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,779,750 Number of Sequences: 28581 Number of extensions: 367042 Number of successful extensions: 1100 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1097 length of database: 12,141,370 effective HSP length: 97 effective length of database: 9,369,013 effective search space used: 1452197015 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= stgn_176098 (1418 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g30825.1 410 e-115 At2g33385.1 190 2e-48 At4g39950.1 30 3.4 At4g02110.1 29 7.7 At3g45480.1 28 10.0 >At1g30825.1 Length = 319 Score = 410 bits (1054), Expect = e-115 Identities = 211/321 (65%), Positives = 248/321 (77%) Frame = +3 Query: 138 MILLQSPSRYLLQILYNRVQNLEKGVELDCQWVEFDDIRYHIQGSVKXXXXXXXXXXXXX 317 MILLQS SR+LLQ L R QNL+K VELD QW+EFDD+RYH+Q ++K Sbjct: 1 MILLQSHSRFLLQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPN 60 Query: 318 XXXETVLFGGLPLGALEAIKAAYGVVAQILDPPRDGFNLTLKLNLSKLPPDEEQKHALLT 497 E + F GLPLGA+EAIK YG QILDPPRDGF+LTLKLN SK+ PDEE LLT Sbjct: 61 PPPEAMSFDGLPLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKVRPDEE----LLT 116 Query: 498 KIASVREVVMGAPLRAVLKQLVTRTVPSDLGKPVALVHRPNESFFLVPQADKVTVIFPMR 677 K+AS+REVVMGAPL+ + K L +RTV +L + VA++HRPNE+FFLVPQADKVTV FPMR Sbjct: 117 KLASIREVVMGAPLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMR 176 Query: 678 FNDSIDTVLATSFLQEFVEARRTAGLNNAPPCLWSPSPPQELTEAFTEALSANAGFVSFV 857 F DS+DT+LATSFL+EFVEARR A LN AP C WSP+ PQEL A E LSANAGFV+FV Sbjct: 177 FKDSVDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFV 236 Query: 858 IFSRHVEGRKLDRTVWNLSTFHAYVNYHVKCSECFMHTRMRRQVESLIQALDRAKPDPEK 1037 IF RHVEG+KLDRTVWNLSTFHAYV+YHVK SE FMHTRMRR+VES+IQALD+AKP + Sbjct: 237 IFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQAKPLEKT 296 Query: 1038 AKKNSPNRSFKRMSLKDGNNS 1100 N N+SFKR+ L + N++ Sbjct: 297 RSMN--NKSFKRLGLNEVNHT 315 >At2g33385.1 Length = 366 Score = 190 bits (483), Expect = 2e-48 Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 1/306 (0%) Frame = +3 Query: 138 MILLQSPSRYLLQILYNRVQNLEKGVELDCQWVEFDDIRYHIQGSVKXXXXXXXXXXXXX 317 M L+ S L + L ++ EK +E+D + EF I YHI+ SV Sbjct: 1 MAYLERASPTLKETLL-KIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLL 59 Query: 318 XXXETVLFGGLPLGALEAIKAAYGVVAQILDPPRDGFNLTLKLNLSKLPPDEEQKHALLT 497 V + E IK V I+DPPR GF LTL LNL +P +E ++T Sbjct: 60 ETQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIK-IIT 118 Query: 498 KIASVREVVMGAPLRAVLKQLVTRTVPSDLGK-PVALVHRPNESFFLVPQADKVTVIFPM 674 +I+ ++ +++ + L+ +L+ L + + P+ +V+ P+E F++ Q +K+T +FPM Sbjct: 119 RISELQAIILSSQLKEMLRSLNFQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVFPM 178 Query: 675 RFNDSIDTVLATSFLQEFVEARRTAGLNNAPPCLWSPSPPQELTEAFTEALSANAGFVSF 854 F D+ D V+ATSF Q+ + AP C WSP PP +L + L+ N+GFVSF Sbjct: 179 NFKDNSDVVIATSFFQD---------MGKAPQCSWSPIPPLQLRGEPVQDLTTNSGFVSF 229 Query: 855 VIFSRHVEGRKLDRTVWNLSTFHAYVNYHVKCSECFMHTRMRRQVESLIQALDRAKPDPE 1034 I SRH+EG++LD+TVWNL F+A YH+KCS ++ RMR+++E+L++ L+ + E Sbjct: 230 DITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLEEE 289 Query: 1035 KAKKNS 1052 A+ + Sbjct: 290 AAQNEN 295 >At4g39950.1 Length = 542 Score = 30.0 bits (66), Expect = 3.4 Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 22/185 (11%) Frame = +3 Query: 432 LTLKLNLSKLPPDEEQKHALLTK-------IASVREVVMGAP----LRAVLKQLVTRTVP 578 +TL + L KL D +K L I + ++ P L +++KQL T Sbjct: 36 ITLVMLLKKLMTDPNKKKPYLPPGPTGWPIIGMIPTMLKSRPVFRWLHSIMKQLNTEIAC 95 Query: 579 SDLGKP-VALVHRPNESFFLVPQADKVTVIFPMRFNDSI-----DTVLATSFLQEFVEAR 740 LG V V P + ++ Q D + P+ + I T + T F +F + R Sbjct: 96 VKLGNTHVITVTCPKIAREILKQQDALFASRPLTYAQKILSNGYKTCVITPFGDQFKKMR 155 Query: 741 RTAGLNNAPPCL--WSPSPPQELTE---AFTEALSANAGFVSFVIFSRHVEGRKLDRTVW 905 + P W E + A+ + N+G V F +RH G + + ++ Sbjct: 156 KVVMTELVCPARHRWLHQKRSEENDHLTAWVYNMVKNSGSVDFRFMTRHYCGNAIKKLMF 215 Query: 906 NLSTF 920 TF Sbjct: 216 GTRTF 220 >At4g02110.1 Length = 1294 Score = 28.9 bits (63), Expect = 7.7 Identities = 26/96 (27%), Positives = 41/96 (42%) Frame = +3 Query: 534 PLRAVLKQLVTRTVPSDLGKPVALVHRPNESFFLVPQADKVTVIFPMRFNDSIDTVLATS 713 P ++L Q + + P+D +PV + P ES ++ ++T L +S Sbjct: 392 PPSSLLLQELRPSSPNDNLRPVMSISDPTESEEAGHKSP----------TSELNTKLLSS 441 Query: 714 FLQEFVEARRTAGLNNAPPCLWSPSPPQELTEAFTE 821 + V+A TA N C W P + LTE TE Sbjct: 442 NVVPMVDALSTAE-NIISNCAWDEIPEKSLTERMTE 476 >At3g45480.1 Length = 374 Score = 28.5 bits (62), Expect = 10.0 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 7/45 (15%) Frame = +2 Query: 284 KCPASFCIIAHTTSRNCPLWWTSTWSARSHKSS-------IWCSC 397 KC FCI NC + W S S + HKSS +W C Sbjct: 272 KCRKHFCI-------NCKVPWHSNLSCKEHKSSGREPITTVWRQC 309 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,272,225 Number of Sequences: 28581 Number of extensions: 646006 Number of successful extensions: 1715 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1709 length of database: 12,141,370 effective HSP length: 103 effective length of database: 9,197,527 effective search space used: 3393887463 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cangn_203189 (390 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g30825.1 198 8e-52 At2g33385.1 121 1e-28 At5g34970.1 28 2.0 At4g17620.1 27 3.4 At4g24560.1 27 3.4 At2g02955.1 27 4.4 At1g55110.1 26 5.8 At1g10450.1 26 5.8 At1g10250.1 26 5.8 At2g32400.1 26 7.5 At1g72250.1 26 7.5 At1g42740.1 26 7.5 At4g37540.1 26 7.5 At5g51730.1 26 7.5 At1g45231.1 25 9.8 >At1g30825.1 Length = 319 Score = 198 bits (503), Expect = 8e-52 Identities = 96/129 (74%), Positives = 108/129 (83%) Frame = +2 Query: 2 FFLVPHADKVTVIFPMRFSDSIDTVLASSFLQEFVEARRTAGLNNAPPCLWSPSPPEELN 181 FFLVP ADKVTV FPMRF DS+DT+LA+SFL+EFVEARR A LN AP C WSP+ P+EL Sbjct: 160 FFLVPQADKVTVAFPMRFKDSVDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELE 219 Query: 182 EVFTEALSANAGFVSFVIFSRHVEGRKLDRTVWNLLTFHAYVNYHVKCTECFMHTRMRA* 361 E LSANAGFV+FVIF RHVEG+KLDRTVWNL TFHAYV+YHVK +E FMHTRMR Sbjct: 220 GAPKETLSANAGFVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRR 279 Query: 362 VESLIQAID 388 VES+IQA+D Sbjct: 280 VESMIQALD 288 >At2g33385.1 Length = 366 Score = 121 bits (304), Expect = 1e-28 Identities = 55/129 (42%), Positives = 84/129 (65%) Frame = +2 Query: 2 FFLVPHADKVTVIFPMRFSDSIDTVLASSFLQEFVEARRTAGLNNAPPCLWSPSPPEELN 181 F++ +K+T +FPM F D+ D V+A+SF Q+ + AP C WSP PP +L Sbjct: 163 FYVFKQPEKITAVFPMNFKDNSDVVIATSFFQD---------MGKAPQCSWSPIPPLQLR 213 Query: 182 EVFTEALSANAGFVSFVIFSRHVEGRKLDRTVWNLLTFHAYVNYHVKCTECFMHTRMRA* 361 + L+ N+GFVSF I SRH+EG++LD+TVWNLL F+A YH+KC+ ++ RMR Sbjct: 214 GEPVQDLTTNSGFVSFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKR 273 Query: 362 VESLIQAID 388 +E+L++ ++ Sbjct: 274 METLVKLLN 282 >At5g34970.1 Length = 479 Score = 27.7 bits (60), Expect = 2.0 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -1 Query: 279 QTVLSSFLPSTWREKITKLTNPALADNASVNTSFSSSGGDGDHKQ 145 +TVLS + +ITK+T P AD S S + S D KQ Sbjct: 414 ETVLSEHAENRSNNRITKITRPQQADARSRMWSSNRSSNRQDMKQ 458 >At4g17620.1 Length = 545 Score = 26.9 bits (58), Expect = 3.4 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = -1 Query: 243 REKITKLTNPALADNASVNTSFSSS--GGDGDHKQGGALLSPAVRLASTNSCRKDDARTV 70 R K + N + + ++S ++S SSS GGDG+ GGA A S +S K++ Sbjct: 26 RSKSSSSGNASSSSSSSSSSSSSSSAAGGDGEGDGGGADSGSASDSGSGSSGGKEEHGDD 85 Query: 69 SMES 58 +ES Sbjct: 86 KVES 89 >At4g24560.1 Length = 1009 Score = 26.9 bits (58), Expect = 3.4 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +2 Query: 260 KLDRTVWNLLTFHAYVNYHVKCTECFMHTRMRA*VESLIQAID 388 KL+ T LTF Y+ +KC +C + + +R + L ID Sbjct: 656 KLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEID 698 >At2g02955.1 Length = 667 Score = 26.6 bits (57), Expect = 4.4 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Frame = +2 Query: 38 IFPMRFSDSIDTVLASSFLQEFVEARRTAGLNNAPPCLWSPSPPEELNEVFTEALSANAG 217 ++ RFSD + +SS E V + GL+ + S PE+L E+ + L + G Sbjct: 509 LYDSRFSDGNNPCSSSSRRNESV----SIGLDLSSSEHRESSSPEKLKEIAIKRLITDMG 564 Query: 218 FVSFVIFSRHVEGRKLDRTVW------NLLTFHAYVNYHVKCTEC 334 F V+ ++LD + L + A+ +Y++ C Sbjct: 565 DDLFCYIPPRVKVKRLDYLQYVRKKEDGALIYAAHADYYILLRVC 609 >At1g55110.1 Length = 456 Score = 26.2 bits (56), Expect = 5.8 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = -1 Query: 198 ASVNTSFSSSGGDGDHKQGGALLSPAVRLASTNSCRKDDARTVSMESLNLIGNMTVTLSA 19 +SVNT SS ALL A ++ ST S ++ S S N + +T T++A Sbjct: 306 SSVNTGRSSFPHPSPAMSATALLQKAAQMGSTKSTTPEEEERSSRSSYNNL--ITTTMAA 363 >At1g10450.1 Length = 1174 Score = 26.2 bits (56), Expect = 5.8 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 9/54 (16%) Frame = +2 Query: 179 NEVFTEALSANAGFVSFVIFS---------RHVEGRKLDRTVWNLLTFHAYVNY 313 N F + A G S+V+F+ +H+ D T LL HAY NY Sbjct: 952 NTKFEDECRAIFGAQSYVLFTLDKLVQKFVKHLHSVASDETDTKLLQLHAYENY 1005 >At1g10250.1 Length = 78 Score = 26.2 bits (56), Expect = 5.8 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 9/54 (16%) Frame = +2 Query: 179 NEVFTEALSANAGFVSFVIFS---------RHVEGRKLDRTVWNLLTFHAYVNY 313 N F + A G S+V+F+ +H+ D T LL HAY NY Sbjct: 15 NTKFEDECRAIFGAQSYVLFTLDKLVQKFVKHLHAVASDETDTKLLQLHAYENY 68 >At2g32400.1 Length = 922 Score = 25.8 bits (55), Expect = 7.5 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = +2 Query: 74 VLASSFLQEFVEARRTAGLNNAPPCLWSPSPPEELNEVFTEALSANAGFVSFV 232 V +++FV RR ++ P WS SP L E+ + FV FV Sbjct: 840 VFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFD-------FVEFV 885 >At1g72250.1 Length = 1196 Score = 25.8 bits (55), Expect = 7.5 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 158 PSPPEELNEVFTEALSANAGFVS 226 PSPP + E T +S N+G +S Sbjct: 159 PSPPGDFRESMTPVISINSGSIS 181 >At1g42740.1 Length = 360 Score = 25.8 bits (55), Expect = 7.5 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +2 Query: 23 DKVTVIFPMRFSDSIDTVLASSFLQEFVEARRTAGLNNAPPCLWSPSPPEELNEV 187 DK+ V P+ ID V +SS ++ +V+ T LNN + + ELN V Sbjct: 172 DKLIVEMPL-----IDVVKSSSIVRHYVKRMVTKDLNNEHGVMMFSAHIVELNSV 221 >At4g37540.1 Length = 241 Score = 25.8 bits (55), Expect = 7.5 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -1 Query: 261 FLPSTWREKITKLTNPALADNASVNTSFSSSGGDGDHKQ 145 FLP + K+ K P SV TS +G GD+KQ Sbjct: 188 FLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQ 226 >At5g51730.1 Length = 413 Score = 25.8 bits (55), Expect = 7.5 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = -1 Query: 234 ITKLTNPALADNASV-NTSFSSSGGDGDHKQGGALLSPAVRLASTNSCRKDDARTVSMES 58 + + P + ++AS + S G + HK+ TN+C+K+ +R VS + Sbjct: 99 VKNIVRPVIQNSASSEDLKISDQGEEPAHKKAKT---------DTNTCKKESSRNVSSKE 149 Query: 57 LNLIGNMTV 31 +++ T+ Sbjct: 150 SDVVKKETL 158 >At1g45231.1 Length = 539 Score = 25.4 bits (54), Expect = 9.8 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +2 Query: 227 FVIFSRHVEGRKLDRTVWNLLTFHAYVNYH-VKCTE 331 +++FSR EG K+D W +T +H +C E Sbjct: 332 YLLFSRFDEGIKMDEEGWFSVTPELIAKHHATRCNE 367 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,451,326 Number of Sequences: 28581 Number of extensions: 161504 Number of successful extensions: 472 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 459 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 471 length of database: 12,141,370 effective HSP length: 88 effective length of database: 9,626,242 effective search space used: 394675922 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_120987 (813 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g30825.1 295 2e-80 At2g33385.1 148 3e-36 At3g25500.1 28 6.2 At3g21110.1 28 8.1 At2g37840.1 28 8.1 At1g32230.1 28 8.1 At1g32230.2 28 8.1 At2g37840.2 28 8.1 >At1g30825.1 Length = 319 Score = 295 bits (756), Expect = 2e-80 Identities = 151/222 (68%), Positives = 180/222 (81%) Frame = +3 Query: 18 GFRKTLKLNLSKLPPDEEHKHGVLTKIASVREVVLGAPLRVFLKQLASRTVASDIDKVVA 197 GF TLKLN SK+ PDEE +LTK+AS+REVV+GAPL++ K LASRTVA ++D++VA Sbjct: 96 GFSLTLKLNFSKVRPDEE----LLTKLASIREVVMGAPLKIIFKHLASRTVAPELDRLVA 151 Query: 198 LVHRPMESFFLIPQVEKVTVVFPMRFKDSIDILLATSFLKEFVDARRTAGLNNAXXXXXX 377 ++HRP E+FFL+PQ +KVTV FPMRFKDS+D +LATSFLKEFV+ARR A LN A Sbjct: 152 IMHRPNETFFLVPQADKVTVAFPMRFKDSVDTILATSFLKEFVEARRAAALNTAPSCSWS 211 Query: 378 XXXXXELKGAPPEALSSNAGFVSFVIFPRHVEGRKLDRTVWSLSTFHAYVSYHVKCSEGF 557 EL+GAP E LS+NAGFV+FVIFPRHVEG+KLDRTVW+LSTFHAYVSYHVK SEGF Sbjct: 212 PTAPQELEGAPKETLSANAGFVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGF 271 Query: 558 MHTRMRRRVESLIQALDSAKPEYEKAVKATQNRSFKRLSLKD 683 MHTRMRRRVES+IQALD AKP EK ++ N+SFKRL L + Sbjct: 272 MHTRMRRRVESMIQALDQAKP-LEK-TRSMNNKSFKRLGLNE 311 >At2g33385.1 Length = 366 Score = 148 bits (374), Expect = 3e-36 Identities = 76/207 (36%), Positives = 129/207 (62%), Gaps = 1/207 (0%) Frame = +3 Query: 18 GFRKTLKLNLSKLPPDEEHKHGVLTKIASVREVVLGAPLRVFLKQLASRTVASDIDKV-V 194 GF+ TL LNL +P +E ++T+I+ ++ ++L + L+ L+ L + + I+ + + Sbjct: 95 GFQLTLGLNLDNIPRGKEAIK-IITRISELQAIILSSQLKEMLRSLNFQDDSRSINNMPI 153 Query: 195 ALVHRPMESFFLIPQVEKVTVVFPMRFKDSIDILLATSFLKEFVDARRTAGLNNAXXXXX 374 +V+ P E F++ Q EK+T VFPM FKD+ D+++ATSF ++ + A Sbjct: 154 RIVYHPSEPFYVFKQPEKITAVFPMNFKDNSDVVIATSFFQD---------MGKAPQCSW 204 Query: 375 XXXXXXELKGAPPEALSSNAGFVSFVIFPRHVEGRKLDRTVWSLSTFHAYVSYHVKCSEG 554 +L+G P + L++N+GFVSF I RH+EG++LD+TVW+L F+A YH+KCS G Sbjct: 205 SPIPPLQLRGEPVQDLTTNSGFVSFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRG 264 Query: 555 FMHTRMRRRVESLIQALDSAKPEYEKA 635 ++ RMR+R+E+L++ L++ E E A Sbjct: 265 YIQRRMRKRMETLVKLLNNTSLEEEAA 291 >At3g25500.1 Length = 1052 Score = 28.1 bits (61), Expect = 6.2 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Frame = -3 Query: 310 KEVARRISIESLN--LIGNTTVTFST*GMRKKDSMGRCTRATTLSMSEATVLEASCLRNT 137 +E R+ + N + N T++ S+ S G R+T +S+S + + S + Sbjct: 263 REPLNRVGLPGQNPRSVNNDTISCSS------SSSGSPGRSTFISISPSMSPKRSEPKPP 316 Query: 136 LNGAPNTTSLTDAIFVKTPCLCSSSGGSFDKFNFNVFLN 20 + P LTD FV++P L +S S K + V LN Sbjct: 317 VISTPEPAELTDYRFVRSPSLSLASLSSGLKNSDEVGLN 355 >At3g21110.1 Length = 412 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 157 ASCLRNTLNGAPNTTSLTDAIFVKTPCLCSSS 62 A C+R+TLN S T +VK+P S S Sbjct: 2 AQCVRSTLNPVRTPQSFTRKAYVKSPAFASVS 33 >At2g37840.1 Length = 734 Score = 27.7 bits (60), Expect = 8.1 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = -1 Query: 141 ILLTGHPIPLPSQMQSSSKPH 79 +L++G P+ +PS SSSKP+ Sbjct: 420 VLVSGPPVDMPSSSSSSSKPY 440 >At1g32230.1 Length = 590 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = -1 Query: 213 WADAPEQQPCQCQKQLS*KQAV*EILLTGH 124 W D PE C Q +L K A E L GH Sbjct: 100 WNDLPEHVICAIQNELEEKSAAIEFKLCGH 129 >At1g32230.2 Length = 589 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = -1 Query: 213 WADAPEQQPCQCQKQLS*KQAV*EILLTGH 124 W D PE C Q +L K A E L GH Sbjct: 100 WNDLPEHVICAIQNELEEKSAAIEFKLCGH 129 >At2g37840.2 Length = 597 Score = 27.7 bits (60), Expect = 8.1 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = -1 Query: 141 ILLTGHPIPLPSQMQSSSKPH 79 +L++G P+ +PS SSSKP+ Sbjct: 283 VLVSGPPVDMPSSSSSSSKPY 303 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,171,184 Number of Sequences: 28581 Number of extensions: 382442 Number of successful extensions: 911 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 885 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 908 length of database: 12,141,370 effective HSP length: 98 effective length of database: 9,340,432 effective search space used: 1606554304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At1g30825.1 (957 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g30825.1 591 e-169 At2g33385.1 186 2e-47 At5g48130.1 29 4.6 At3g47790.1 28 7.8 >At1g30825.1 Length = 319 Score = 591 bits (1524), Expect = e-169 Identities = 302/318 (94%), Positives = 302/318 (94%) Frame = +1 Query: 1 MILLQSHSRFLLQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKXXXXXXXXXXXXX 180 MILLQSHSRFLLQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMK Sbjct: 1 MILLQSHSRFLLQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPN 60 Query: 181 XXXEAMSFDGLPLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKVRPDEELLTKLAS 360 EAMSFDGLPLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKVRPDEELLTKLAS Sbjct: 61 PPPEAMSFDGLPLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKVRPDEELLTKLAS 120 Query: 361 IREVVMGAPLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDS 540 IREVVMGAPLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDS Sbjct: 121 IREVVMGAPLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDS 180 Query: 541 VDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPR 720 VDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPR Sbjct: 181 VDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPR 240 Query: 721 HVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQAKPLEKTRSMN 900 HVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQAKPLEKTRSMN Sbjct: 241 HVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQAKPLEKTRSMN 300 Query: 901 NKSFKRLGLNEVNHTNSK 954 NKSFKRLGLNEVNHTNSK Sbjct: 301 NKSFKRLGLNEVNHTNSK 318 >At2g33385.1 Length = 366 Score = 186 bits (472), Expect = 2e-47 Identities = 99/304 (32%), Positives = 170/304 (55%), Gaps = 4/304 (1%) Frame = +1 Query: 1 MILLQSHSRFLLQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKXXXXXXXXXXXXX 180 M L+ S L +TLL + +K +E+D + EF + YH++ ++ Sbjct: 1 MAYLERASPTLKETLL-KIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLL 59 Query: 181 XXXEAMSFDGLPLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKVRPDEE---LLTK 351 A++ + E IK I+DPPR GF LTL LN + +E ++T+ Sbjct: 60 ETQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITR 119 Query: 352 LASIREVVMGAPLKIIFKHLASRTVAPELDRL-VAIMHRPNETFFLVPQADKVTVAFPMR 528 ++ ++ +++ + LK + + L + + ++ + + I++ P+E F++ Q +K+T FPM Sbjct: 120 ISELQAIILSSQLKEMLRSLNFQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVFPMN 179 Query: 529 FKDSVDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFV 708 FKD+ D ++ATSF ++ + AP CSWSP P +L G P + L+ N+GFV+F Sbjct: 180 FKDNSDVVIATSFFQD---------MGKAPQCSWSPIPPLQLRGEPVQDLTTNSGFVSFD 230 Query: 709 IFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQAKPLEKT 888 I RH+EGK+LD+TVWNL F+A YH+K S G++ RMR+R+E++++ L+ LE+ Sbjct: 231 ITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTS-LEEE 289 Query: 889 RSMN 900 + N Sbjct: 290 AAQN 293 >At5g48130.1 Length = 626 Score = 28.9 bits (63), Expect = 4.6 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +1 Query: 340 LLTKLASIREVVMGAPLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAF 519 LLT+ + R V +G + +L TV D++V+++H F+ P+A VAF Sbjct: 278 LLTRDKAYRFVPVGFYFACLAHNLKHDTVLKLQDQIVSLLHTAQPENFIYPKAGNRQVAF 337 >At3g47790.1 Length = 902 Score = 28.1 bits (61), Expect = 7.8 Identities = 18/74 (24%), Positives = 35/74 (47%) Frame = +1 Query: 658 GAPKETLSANAGFVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRR 837 G PKE S G + K++++ V N+ST +A Y ++ F + + Sbjct: 805 GNPKELKSRYGGSYVLTVTTSEEHEKEVEQLVHNIST-NAKKIYRTAGTQKFELPKQEVK 863 Query: 838 VESMIQALDQAKPL 879 + + +AL++AK + Sbjct: 864 IGEVFKALEKAKTM 877 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,893,744 Number of Sequences: 28581 Number of extensions: 410053 Number of successful extensions: 1171 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1166 length of database: 12,141,370 effective HSP length: 100 effective length of database: 9,283,270 effective search space used: 2023752860 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)