BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= lgn_149956
         (466 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52730.1                                                           116   6e-27
At5g02490.1                                                            28   1.8  
At1g56410.1                                                            27   3.9  
At5g02500.1                                                            27   5.2  
At2g41000.1                                                            27   6.7  
At3g12580.1                                                            27   6.7  
At1g55050.1                                                            26   8.8  
At3g09440.1                                                            26   8.8  
At5g46040.1                                                            26   8.8  

>At3g52730.1
          Length = 73

 Score =  116 bits (290), Expect = 6e-27
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = +3

Query: 72  MESAARRSGGGVLEGFYRLVMRRTPVYVTFVIAGALLGERAVDYGVKTLWEKNNVGKRYE 251
           ME AARR+  G  EGFY+L+MRR  VYVTF+IAGA  GERAVDYGV  LWE+NNVGKRYE
Sbjct: 1   MEYAARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYE 60

Query: 252 DISVLGQRPVDE 287
           DISVLGQRPV+E
Sbjct: 61  DISVLGQRPVEE 72


>At5g02490.1
          Length = 654

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = +3

Query: 135 RRTPVYVTFVIAGALLGERAVDY----GVKTLWE-KNNVGKRYEDISVLGQR 275
           R TP YV F  +  L+G+ A +      V T+++ K  +G+R+ D SV   R
Sbjct: 39  RTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASVQSDR 90


>At1g56410.1
          Length = 618

 Score = 27.3 bits (59), Expect = 3.9
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +3

Query: 135 RRTPVYVTFVIAGALLGERAVDY----GVKTLWE-KNNVGKRYEDISV 263
           R TP YV F  +  L+G+ A +      V T+++ K  +G+R+ D SV
Sbjct: 39  RTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASV 86


>At5g02500.1
          Length = 652

 Score = 26.9 bits (58), Expect = 5.2
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +3

Query: 135 RRTPVYVTFVIAGALLGERAVDY----GVKTLWE-KNNVGKRYEDISV 263
           R TP YV F  +  L+G+ A +      V T+++ K  +G+R+ D SV
Sbjct: 39  RTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDSSV 86


>At2g41000.1
          Length = 276

 Score = 26.6 bits (57), Expect = 6.7
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
 Frame = +3

Query: 78  SAARRSGGGVLEGF---YRLVMRRTPVYVTFVIAGALLGERAVDYGVKTLWEKNNVGKRY 248
           S   R       GF   +R +  R  +    +  G      A+D   +TLW+  N GK +
Sbjct: 199 STRNRQASSFSSGFDSTFRYLTTRAFLLNLALAGGLYFAFTAIDTSGETLWKMRNSGKSF 258

Query: 249 ED 254
           E+
Sbjct: 259 EE 260


>At3g12580.1
          Length = 651

 Score = 26.6 bits (57), Expect = 6.7
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +3

Query: 135 RRTPVYVTFVIAGALLGERAVDY----GVKTLWE-KNNVGKRYEDISV 263
           R TP YV F  +  L+G+ A +        T+++ K  +G+RY D SV
Sbjct: 39  RTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRYSDPSV 86


>At1g55050.1
          Length = 915

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 204 GVKTLWEKNNVGKRYEDISVLGQRPVD 284
           G++ L E   +GK  ED++VL  +PVD
Sbjct: 248 GLRCLVEAVAIGKDKEDLTVLTTKPVD 274


>At3g09440.1
          Length = 650

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +3

Query: 135 RRTPVYVTFVIAGALLGERAVDY----GVKTLWE-KNNVGKRYEDISV 263
           R TP YV F  +  L+G+ A +      + T+++ K  +G+R+ D SV
Sbjct: 39  RTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTDSSV 86


>At5g46040.1
          Length = 587

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -3

Query: 434 VSYFIQ*ISFKTTAKI*KKASNGD*QNNY--*NIDNKYFVSSQINFITENLFI 282
           V YF+  I   + ++I KK   G  QNN     +DN Y   + +N +   LF+
Sbjct: 503 VGYFMSSILLSSVSQITKKQGRGWIQNNLNESRLDNYYMFFAVLNLLNFILFL 555


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,969,478
Number of Sequences: 28581
Number of extensions: 162204
Number of successful extensions: 365
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,141,370
effective HSP length: 91
effective length of database: 9,540,499
effective search space used: 601051437
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cangn_204283
         (385 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52730.1                                                            76   5e-15
At2g19390.1                                                            28   1.1  
At5g14960.1                                                            27   3.2  
At5g35190.1                                                            27   3.2  
At2g28240.1                                                            27   4.2  
At1g03370.1                                                            27   4.2  
At3g20130.1                                                            27   4.2  
At1g43900.1                                                            26   5.5  
At5g52500.1                                                            26   5.5  
At2g24980.1                                                            26   5.5  
At4g31200.2                                                            26   7.2  
At4g31200.1                                                            26   7.2  
At3g18320.1                                                            26   7.2  
At4g13340.1                                                            26   7.2  
At4g33970.1                                                            26   7.2  
At1g31050.1                                                            25   9.4  
At3g04460.1                                                            25   9.4  
At1g27480.1                                                            25   9.4  
At3g59690.1                                                            25   9.4  

>At3g52730.1
          Length = 73

 Score = 76.3 bits (186), Expect = 5e-15
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = +2

Query: 2   GALLAERAVDYGVHKLWEKNNVGKRYEDISVLGQRPVDE 118
           GA   ERAVDYGVHKLWE+NNVGKRYEDISVLGQRPV+E
Sbjct: 34  GAFFGERAVDYGVHKLWERNNVGKRYEDISVLGQRPVEE 72


>At2g19390.1
          Length = 1212

 Score = 28.5 bits (62), Expect = 1.1
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = -2

Query: 171 KYFCLLSDDEIHFILEIYSSTGLCPKTEISS*RFPTLFFSQSL*TP*STARSASKA 4
           +YF  +SDD I+F+ +    + + P   ++S  F +  F + L    +T+R+ SKA
Sbjct: 696 RYFGYISDDHINFLKQQGELSSMGPTPVLTSSEFDSPVFPEEL----ATSRADSKA 747


>At5g14960.1
          Length = 360

 Score = 26.9 bits (58), Expect = 3.2
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
 Frame = -3

Query: 380 FLCSNTSI*---NARKYLFGRNNDCVKHKPR*HTFQVGNHISFNEFPPKT-TGKYVKESQ 213
           FLCS+  +    +A K L   + D    K     + + N  S  +   KT   +  K + 
Sbjct: 154 FLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYDIANVFSSMKLIEKTHVPETKKPAY 213

Query: 212 QWLISKTIIERSITSTSVS 156
           +WL SKTI E      S S
Sbjct: 214 RWLGSKTIFENRFIDGSAS 232


>At5g35190.1
          Length = 329

 Score = 26.9 bits (58), Expect = 3.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 143 KYTSYWKFIHRQASVPKLRYPHSASQHCSSPKAYEPHSPPP 21
           KY+ Y+      + +P L+Y     ++   PK Y  +SPPP
Sbjct: 48  KYSPYYS----ASPLPPLQYRRQGPKYTPHPKPYLFNSPPP 84


>At2g28240.1
          Length = 654

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 104 SVPKLRYPHSASQHCSSPKAYEPHSPPPVRQVKR 3
           + P+ R P   S H  +P +Y+P S PPV  + R
Sbjct: 574 NTPQPRPPPLISNH--TPTSYQPASAPPVHGIAR 605


>At1g03370.1
          Length = 1860

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 14/87 (16%)
 Frame = -3

Query: 239 TGKYVKESQQWLISKTIIERSITSTSVSCLMMKYTSYWKFIHRQASV------------- 99
           +G YV E  Q L+S T++E       V   +    + W+ +    +V             
Sbjct: 163 SGDYVFEDLQQLVSYTLVEMISLIKEVRPSLSTVEAMWRLLMCDLNVLQAFEAEGDGLVS 222

Query: 98  -PKLRYPHSASQHCSSPKAYEPHSPPP 21
             KL    S     + PK+ +P +P P
Sbjct: 223 SSKLSDSESLGAESNPPKSSDPDNPKP 249


>At3g20130.1
          Length = 516

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 194 TIIERSITSTSVSCLMMKYTSYWKFIHRQASVPKLRYPHSASQ 66
           T ++ S+   S S +   Y  YWKF+ ++ +V KL  P +  Q
Sbjct: 113 TAVDESLVFGSSSFVTAPYGDYWKFM-KKLTVMKLLGPQAQEQ 154


>At1g43900.1
          Length = 372

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +3

Query: 144 HHQTRDRSTCYRSFNNRLAN*PLLA---FFYIFACSFW 248
           H QT+  +T  RSF   L N   ++    FY+F CSF+
Sbjct: 16  HLQTKPTTTLVRSFFFFLFNSQTISSFIIFYLFLCSFF 53


>At5g52500.1
          Length = 364

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = -3

Query: 275 NHISFNEFPPKTTGKYVKESQQWLISKTIIERSITSTSVSCLMMKYTSYWKFIHRQASVP 96
           N+ S + + P  T    K S + L+SK        ST  SC+++ + + + F       P
Sbjct: 13  NNDSSSYYSPAKTTFRSKLSSRLLLSKA------ESTISSCIILLFLTLFLFTLSTFEEP 66

Query: 95  KLRYPHSASQH 63
             R+P  +S H
Sbjct: 67  SSRFPAISSPH 77


>At2g24980.1
          Length = 560

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = -3

Query: 161 VSCLMMKYTSYWKFIHRQASVPKLRYPHSASQHCSSPKAYEPHSPPP 21
           +S +    TSY     +  S     Y H   ++   PK Y   SPPP
Sbjct: 13  LSAIAATVTSYPYSSPQTPSYNSPSYEHKGPKYAPHPKPYVKSSPPP 59


>At4g31200.2
          Length = 651

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = -3

Query: 113 RQASVPKLRYPHSASQHCSSPKAYEPHSPPPVRQ 12
           RQ   P     H   QH   P  + PH+ P   Q
Sbjct: 222 RQPPFPPFHDHHQLQQHLPQPHPFAPHARPDFDQ 255


>At4g31200.1
          Length = 651

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = -3

Query: 113 RQASVPKLRYPHSASQHCSSPKAYEPHSPPPVRQ 12
           RQ   P     H   QH   P  + PH+ P   Q
Sbjct: 222 RQPPFPPFHDHHQLQQHLPQPHPFAPHARPDFDQ 255


>At3g18320.1
          Length = 300

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -3

Query: 155 CLMMKYTSYWKFIHRQASVPKLRYPHSASQHCSSPKAYEPHSPP 24
           CL +K  +YW  I R+   P LR         +    Y P  PP
Sbjct: 116 CLSLKGNTYWLGIDRRRRPPDLRITLIKFDFGTEKFGYVPLPPP 159


>At4g13340.1
          Length = 761

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 107 ASVPKLRYPHSASQHCSSPKAYEPHSPPP 21
           +S P    P     +C+ P    PHSPPP
Sbjct: 519 SSPPPPPSPAPTPVYCTRPPPPPPHSPPP 547


>At4g33970.1
          Length = 700

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 110 QASVPKLRYPHSASQHCSSPKAYEPHSPPP 21
           Q+ V K R P  A  +   P  Y P  PPP
Sbjct: 509 QSPVTKRRSPPPAPVNSPPPPVYSPPPPPP 538


>At1g31050.1
          Length = 73

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 211 CWLSFTYLPVVFGGNSLNEIWLPT 282
           C +  +Y P+ +  NS  + W PT
Sbjct: 42  CLVPISYTPIAYRDNSATDYWNPT 65


>At3g04460.1
          Length = 373

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 77  SASQHCSSPKAYEPHSPPPVRQV 9
           SA +  S+P  Y P  PPP  +V
Sbjct: 278 SAEERLSAPTVYPPPPPPPAPKV 300


>At1g27480.1
          Length = 433

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -3

Query: 290 TFQVGNHISFNEFPPKTTGKYVK--ESQQWLISKTIIERSITSTSVSCLMMKYTSY 129
           TF  GN +      P    ++ +  ES QWL+  T +    T   V    + YT+Y
Sbjct: 250 TFASGNTLGVPLVNPLLVRRHQRTSESNQWLLPSTKVFHDRTKPLVVTPQVNYTAY 305


>At3g59690.1
          Length = 518

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
 Frame = -3

Query: 143 KYTSYWKFIHRQASVPKLRYPHSASQHCSSPKAYEP---------HSPPPVRQVK 6
           +Y S  K I  + + P++ YP   S    SP+A  P         H P P   VK
Sbjct: 114 RYVSSPKPISPRVAYPQVHYPKPPSPKPPSPRAVSPRIVQRREFVHRPEPSLLVK 168


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,235,190
Number of Sequences: 28581
Number of extensions: 186517
Number of successful extensions: 547
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,141,370
effective HSP length: 88
effective length of database: 9,626,242
effective search space used: 375423438
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cgn_124122
         (585 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52730.1                                                           108   3e-24
At2g07550.1                                                            30   0.96 
At2g29110.1                                                            29   2.1  
At1g62320.1                                                            28   2.8  
At4g08290.1                                                            28   2.8  
At1g24350.1                                                            27   8.1  

>At3g52730.1
          Length = 73

 Score =  108 bits (269), Expect = 3e-24
 Identities = 50/68 (73%), Positives = 54/68 (79%)
 Frame = +2

Query: 95  AARRNGGGVLEGLYKVVMRRTPVYVTFVIVGAFVGERVVDYGVHKLWEHNNIGKRYEDIP 274
           AARRN  G  EG YK++MRR  VYVTF+I GAF GER VDYGVHKLWE NN+GKRYEDI 
Sbjct: 4   AARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYEDIS 63

Query: 275 VLGQRQSE 298
           VLGQR  E
Sbjct: 64  VLGQRPVE 71


>At2g07550.1
          Length = 1357

 Score = 30.0 bits (66), Expect = 0.96
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -3

Query: 250 NVIMLPELMNPIVHHPFTDESSDDDEGDVNGS 155
           N I  PE  +P+V  P T +++DD++ DVN S
Sbjct: 766 NTIPAPE--SPVVSTPTTQDTNDDEDSDVNQS 795


>At2g29110.1
          Length = 948

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 326 KTIKYKS*FIHSASDPELEYLRNASQCYYAPRAYEPHSP 210
           K+  +KS  +H  S P  +Y+ + S    APR   PHSP
Sbjct: 872 KSHTFKSSAVHHVSSPMTQYIPSPSTLQIAPR---PHSP 907


>At1g62320.1
          Length = 770

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 20/76 (26%), Positives = 28/76 (36%)
 Frame = -3

Query: 253 PNVIMLPELMNPIVHHPFTDESSDDDEGDVNGSAAHNNFVEAFKNAPXXXXXXXXXXXSG 74
           PN+ +   L N  VH  F DE   D+EG +  S   +  V   K              S 
Sbjct: 690 PNLNLKGFLQNAYVHPVFKDEEDSDEEGLIEDSDDEDCVVVQTKRQRSRRTTVASSNASR 749

Query: 73  NFRPNSPFFNLLISDG 26
               ++PF  L +  G
Sbjct: 750 GSSQSTPFNQLDLGKG 765


>At4g08290.1
          Length = 385

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 262 VTLPNVIMLPELMNPIVHHPFTDESSDDDEGDVNGSAAHNNFV 134
           V L   +++     P++  P+++ + D   G  N S  HNN+V
Sbjct: 145 VGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWV 187


>At1g24350.1
          Length = 169

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 225 ISSGSIITLGSVTKIFQFWVRGRVNESAFVLDSFGRPSSFQVKIRLLAM 371
           IS+ +  T+    K+F  W R R  +   ++ S G PSS    +  LA+
Sbjct: 26  ISAVTSFTIAQFIKLFTSWYRERRWDLKQLIGSGGMPSSHSATVTALAV 74


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,951,868
Number of Sequences: 28581
Number of extensions: 241540
Number of successful extensions: 809
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,141,370
effective HSP length: 94
effective length of database: 9,454,756
effective search space used: 945475600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At3g52730.1
         (219 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52730.1                                                           149   2e-37
At2g41000.1                                                            30   0.26 
At1g60350.1                                                            28   1.3  
At5g34930.1                                                            27   1.7  
At1g60280.1                                                            27   2.2  
At1g52030.2                                                            27   2.2  
At1g52030.1                                                            27   2.2  
At1g04890.1                                                            27   2.9  
At2g31900.1                                                            26   4.9  
At2g30780.1                                                            26   4.9  
At1g14220.1                                                            25   6.4  
At4g20940.1                                                            25   6.4  
At3g14840.2                                                            25   8.4  

>At3g52730.1
          Length = 73

 Score =  149 bits (377), Expect = 2e-37
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   MEYAARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYE 180
           MEYAARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYE
Sbjct: 1   MEYAARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYE 60

Query: 181 DISVLGQRPVEE 216
           DISVLGQRPVEE
Sbjct: 61  DISVLGQRPVEE 72


>At2g41000.1
          Length = 276

 Score = 30.0 bits (66), Expect = 0.26
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +1

Query: 7   YAARRNQKGAFE-GF---YKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKR 174
           Y+ R  Q  +F  GF   ++ +  R  +    +  G +F   A+D     LW+  N GK 
Sbjct: 198 YSTRNRQASSFSSGFDSTFRYLTTRAFLLNLALAGGLYFAFTAIDTSGETLWKMRNSGKS 257

Query: 175 YED 183
           +E+
Sbjct: 258 FEE 260


>At1g60350.1
          Length = 321

 Score = 27.7 bits (60), Expect = 1.3
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -1

Query: 207 WP--LTQHRDVFISFPNIVAFPELMNTVIHSPFTEKCAGDD--ESDVDGITAHDKFVKAF 40
           WP    +  DVF   PN+    E  + VI  P TE C   D  E+    I   DK +K+ 
Sbjct: 37  WPDHFIEDADVFNKNPNVEFDAESPSFVIVKPRTEACGKTDGCETGCWRIMGRDKPIKST 96

Query: 39  ES 34
           E+
Sbjct: 97  ET 98


>At5g34930.1
          Length = 641

 Score = 27.3 bits (59), Expect = 1.7
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +2

Query: 35  LSKAFTNLSCAVIPSTSLSSSPAHFSVNGLWITVFISSGNAT 160
           LS +FT+LS +++PS SLS++  H SV    I +  S+ NAT
Sbjct: 11  LSLSFTSLS-SMLPSLSLSTANRHLSVTDT-IPLPNSNSNAT 50


>At1g60280.1
          Length = 348

 Score = 26.9 bits (58), Expect = 2.2
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
 Frame = -1

Query: 207 WP--LTQHRDVFISFPNIVAFPELMNTVIHSPFTEKCAGDD--ESDVDGITAHDKFVKAF 40
           WP    +  DVF   PN     +    VI  P TE C   D  +S    I   DK +K+ 
Sbjct: 55  WPDHFIEDVDVFNKNPNEEFHSQSPRFVIVKPRTENCGRTDGCQSGCWRIIGRDKLIKSK 114

Query: 39  ESAFLISPSSVL 4
           E+  ++    +L
Sbjct: 115 ETGKILGFKKIL 126


>At1g52030.2
          Length = 643

 Score = 26.9 bits (58), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 31  GAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWE 153
           GAF+G  K+++ RN  +V+++      GER V +   K  E
Sbjct: 173 GAFDGVRKVLVGRNGKFVSYVRFEYAKGERMVPHAHGKRQE 213


>At1g52030.1
          Length = 643

 Score = 26.9 bits (58), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 31  GAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWE 153
           GAF+G  K+++ RN  +V+++      GER V +   K  E
Sbjct: 173 GAFDGVRKVLVGRNGKFVSYVRFEYAKGERMVPHAHGKRQE 213


>At1g04890.1
          Length = 495

 Score = 26.6 bits (57), Expect = 2.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 156 AFPELMNTVIHSPFTEKCAGDDESD 82
           AF E   T +  P+ E C+ DD+ D
Sbjct: 128 AFDETAKTNLMQPYDETCSNDDQKD 152


>At2g31900.1
          Length = 1491

 Score = 25.8 bits (55), Expect = 4.9
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +1

Query: 4   EYAARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYED 183
           E  ARR +     G  KLI R+   Y+T      F G++     + KLW      K Y++
Sbjct: 659 ELDARRTE--VLAGATKLIQRQIRTYLT---RKEFLGQKRATIYMQKLWRAKLARKLYQN 713

Query: 184 I 186
           +
Sbjct: 714 M 714


>At2g30780.1
          Length = 453

 Score = 25.8 bits (55), Expect = 4.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 19  RNQKGAFEGFYKLIMRRNSVYVTFIIAG 102
           +N + AFE   K+ +  NSV   F+IAG
Sbjct: 191 KNMEAAFEELQKVKLPPNSVTYNFLIAG 218


>At1g14220.1
          Length = 229

 Score = 25.4 bits (54), Expect = 6.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 112 GERAVDYGVHKLWERNNVG 168
           G+ A D+G+H LW   N G
Sbjct: 54  GKPAADFGIHGLWPNYNGG 72


>At4g20940.1
          Length = 978

 Score = 25.4 bits (54), Expect = 6.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 91  IIAGAFFGERAVDYGVHKLWERNNVGKRYEDISVLGQRPVE 213
           ++ GA    R  DY +H+L  +    ++  D  +LG R  E
Sbjct: 828 LLDGAELNARVADYCLHRLMTQAGTVEQILDAGILGYRAPE 868


>At3g14840.2
          Length = 989

 Score = 25.0 bits (53), Expect = 8.4
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +1

Query: 157 NNVGKRYEDISVLGQRPVEE 216
           +N+G+RY DI V G+R V++
Sbjct: 485 SNLGRRYFDIYVQGKREVKD 504


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,921,161
Number of Sequences: 28581
Number of extensions: 87955
Number of successful extensions: 341
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 12,141,370
effective HSP length: 48
effective length of database: 10,769,482
effective search space used: 258467568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)