Sol Genomics Network

Solanum lycopersicum gene Solyc03g097110.2

Name Solyc03g097110.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc03g097110	Length 5,642

Description

RNA recognition motif-containing protein (AHRD V1 **-- D7M9G3_ARALY); contains Interpro domain(s) IPR001395 Aldo/keto reductase

Location(s)

SL2.50ch03:59446020..59451661

GFF source

ITAG_eugene

From BOGAS: 1

Length: 5642

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc03g097110.2.1	SL2.50ch03:59446020..59451661	1,310	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc03g097110.2 SL2.50ch03:59451661..59446020 (sequence from reverse strand)
CAGCGTGTCCATTTTTCCCATTTCTCTTCTCCCTCTCGCACGTCACTCGTTGACGTTTTTGAAGTACACCACTTTTTCCCTAAAACCCACAACCCTTCTTTTCTCTTCTTCTACGTAACTCACATACGCTCAATTTCTACAAATATATTTGCTTCAAATAACTCTATTGTGGTTCTCTGATCTTCTTCTGATTCGATGTCGGTGAGTAGTTCATCATCTCTTTCTGGTTTTTTTTTGGTTTTAATAGTTGTTAATTAGTTTGATCTGTTAAGAATATATGAATTACTGTTCTATTGGATTCGATTTGCTTTTGATTGAATTTGTTTTTTTTTTAATCGAGTTTAGCAGTTTGGCTATGTGTTTGTAATTGTTATCGATTGAAATACCCTAGATTTTGATTGTTGTAGTGAGGTTAGGGTGTCGGTAGTTGTTATTGCACAGTGATACCCTATTACTTGGATTTGGTAGATAAAATATGTTGCAATGTAGTGCTGCTTATTGTTTTCGAGCATTTAGTAGTGGAAGTGTTTAATTCGTACGTGAGTGGCTTTTGTTGTTACAAAAGTGGATTGCATTAGAAATGTTGATTAAAATGCTTTTGGAAGATTGTTAGATTCCAGATCATTAGTCTCATTTGTAACCGATGATTGAGAAGCAATAAGGTCCTTTATTGGGCGACGAAGTGTATTTTTCGAATAACTCGATTTATGAATGTATGTTTTTCTTTCTCAAATTTTGCGGTTTTAGTCCAGTACGATTTATGAATGTATGTTTTTCTTTCTCAAATTTTGCGGTTTTAGTCCGTTACAATGTTCTGTGGTGGCCTTAGTTTCTCATATGAGACATTTTCTATTTATTTATTTTTTGATAACAAGGGAAACCCACAGCCGCTACCCTTTGGGTTAGGAGAGGTACCCCGCTCGACCCAGAGGGCAAAACCCTTTGTTTTTGCTGGCAAGGGGTTTCGAACCTGAGACCTCTAACATGGAAGTCCTAAGCCCAAACCACTGGGCCGCCCCGAAGGGTTGAGACATTACTTTCTATAGAATGATAAATGGACAAATGAAGATCATTTCTAAAAGATAGACAGTATGTTGGACTGAATATCAAACTGATTTTCTTATGAGAAGAGTAAAATTCAATATCCTATTCTGTAGTGTGCCGATTATTGACCGAGTTTCAAAATGTGTGCTACTAGCCTCGGGGATTTCATGGTTATAAAAAGAAAGTGTATTCAATGGTGTATTTTGATAATATGTGGTAACGCCCATTTTACAGTTATGACTCTAAGAAGCTTAAGTGTAATTCCTGAATGCCTCAGGTTTTACTCCTCCATAACAGTAAGTCCACAAGTGAGAAAAGTCTTGCTTAATGACGGCAAGATTACAGGATTCTTCACTAACCTTCTAAAAAGAAAAAGAAAAATCTACATATAAAATGCATAACCTTTTCCCCTATGTTGTCAAGTCTCTTACTATTCATTTCTTGTTGTTCATCATGATAGGCTAGAACAGTGAAAGTGAGCAATGTTTCTCTGAGTGCATCGGAGCAAGATATCAAGGAGTTCTTTTCATTCTCCGGGGATATTGAATATGTTGAGATGATGAGGTTAGTGCTTGTACTAGAAAGTATTTTCCTTTTTCTCTCCTCTTCTATATGTTTACCATCTAGGCATATTTTGAAATCAGAAATAACCTTCCTTTTGAGAATTTAAAAATAGTTTTTATCAAAAAAAGAAATTAAATCAGTTGATGCAATATTAGCTCCTTGTTGCATATGTCTTTTATGGATTTATGCAAGTTACTTTTCTGGCTATTCTAGTGAGAATGAGTGATATATGTCTATTGTGGATTTATGCAAGTTACTTTTCTGGCTATTCTAGTGAGAATGAGCGATCTCAAATTGCATATGTCACATTCAAGGATCTCCAGGGTGCAGAAACTGCAGTTCTTCTTTCTGTAAGTTTACTTTTCTTCTCCTTTGAACTCCTATGTTAAATCTTTACTGTACAAGTATAATAATTGCCCCTGGTTTAAGTCTGACAGATTTGATGTTGAAAATGCTGGTAAGTTTCTTATTGAATGATTGATTTTAGGGAAGTAAGATATATATTGTCTTTGAATTTCATCGTGTCATTGAGTGCATTTCCGCAAAAGATAATGATTTCCTGATTAAATTCTGTCAGCGTCGTTGGTCAGAAGTGATAAAAGCCCCTTACTTGTCTTCTTATTAAAATATTTTTTATTTATCCTTCTATTGTCTATGACATTTGCTGTTTCATCAAATGAGGCAACGGCAAACAAATTGAGGTTCTTGTTAGAAAATTGTTGTCACAGTTGCTTCACTAGGTTGGTGTGTTAGTTCCTTTTGAGGCTTTATGTAGTATCTAGAACTTTTGGCTTTTGTAGTATGTGCTTTTGTCCATCAGCAGTGTTCTATTTTTATTTAGTAAAAAACACTGCTGGCCCTTTATTGTCATTTACACAAGGGATAGGTTTGCATGTTGATTAATATTAGAGGGGTTCCATGCACGTTGTGTTGCTGGTAATAAATTTGATATGCCCTCTAAGAAATGTTGTGGTCTTCCTTTCAGTAGCTTAAGTAAACATTTTGTGTGCCCTCTAAGAAATGTTGTGGTCTTTCTTTCAGTAGCTTAAGTAAACATTTTGACTGACAGCCGCTTTAAACTTGTAAAACCTTCAAAAATCTAGATACCATTAGAGCTAATTATCCGTGTAGTACTGAACTCTGCACTGCCAGTGGTCCTCTGCATTTCAGCTTATATGCTGGAACCCGGGTATTCATTAGAAGATGAAAGGGGAATGTTATGTTCCATGATACAGGCAATTATTTCACTGTTAGAAGTTTGTCACTCTTAAAATGCATGAGCACAAAGAAACCTACAATTCTTTTGAGAGGAAGGTGGAGTTTTTCCATCAAAATTCATATTTGGGTTTTAGTTATCAGTATTTTATTATTTTATATGCCTTATCTTCTTTTTTTTTAATCACGAGGGAAACTCGTAGCTAGTACCCTTTGGGTGCGCACGGGATATTTACCCTACTCCTATGTAATAGCTTGTAAACCACATAGTAACCCTCACTAGGCAAGCCCGGTTATGGGTGGTAATTTCAATCCATATTAATAAAACGAGTCCATTTTGGTCATATTTAATGACTTAGATCACTCATATTTTAATTAGTTAAATATGAGTTTCAAATTATTTTAGGAGTCTCTATAAATATGGTCAAAATGGGTTAAATAGGGGTATCTATTTGATCCATATTAAATCACTGATTTTCACTTTCACTTTCAAACTTAATTGATTTTTTGAAAAAGAAGAAAAAGTTAGGGGTAGGTTGGTGGAGGTGGGGGGAGGAGGTTAAAGAAAAAATTCTTGCAAAAACAGATTTTTTTTTGTTTTTGAAAAATAAAAAAATTTAGGATAGGTTGGTGGAAGGTGATGTGTGTGTGTGTGGGGCCGGGGAAAGGGGTAAATTTTTTTTATTTTTGCAAAAACATATTTTATTTTTGTTTTTGAAAAATAAAAAAAAATTAGGGGTAGGTTTGTGGAAGGTAGGGGTGGGGGTAAACCTTTTTTTTCTTTTTTTTTTTTTTTTGCAAAAAACAGATTTTTTTTGTTTTTGAAAACTAAAAAAAAATTTAAGGGTAGGTTGGTGGAAGGTGGGGGACGGGGGGGCACGGGGGAGGGGGTAAATCTTTTATTTTATTTTTTTGAAAAAACAGATTTTTTGTTTTGTTTTTGGAGAATAAAATTTTTTTAGGGGTAGGTTGGGGGTATTTGGGGAGGGGTACATTTATGTTTTTGGAAAACAAACTTGTTTAAATGAGTTAGAACCATTTTGTCCAAACCATATTTGACCAAATCCATATTTGTCCATATTATATTTGGATGGATCGTGAATCAAACCATTTTCTCAACCATATGCGGTCCATGCAAATCCAATCCAATCCAACTGTTTGTCACCCCTAAGCCCGGTGGACGAGCTCAATCTAGAAGGCAAACCCCTTGCTTTCGCTGGCAAGGGAAACTTGAGACCTCCAACATGAAAGTCCCAAGCCAAACCTGAAACCATTGGGCCCTCCCAAAGGGTTATGCCTTCTCTTCTGTCATTCCTTTATGTGCTCTTGAACGAAAAGGGAAGAAGATTTGAATGCCCGGTTCTGTGAGAGAATTTTTCTGCAACCAAAAAGGAATAATTGTTTGAAATCAACTCTTTGCCCATCTGATGCATATATGGCCTTCTCCCTCAGCCATTTGATGGCTTTTATTTGTACTGATTGACTGAGTCAGTGTAGCCGTTTCTTTAAAAGGTTCCTAGGAGTAAAATGCTTCAGAAAGTCTAGGGAGGAAATTGTAGATAATAAGATACAAATGACCCCCTCCTGTTCTCTTTCCTTTGCATTAGCCTAAAGTAAACGACATAATTGGTAACAGCTAACCCAAAAAACTTTGACTTGTTGAAAGTCTTGCAATTGGTTGATCAGTTAGCTTGCGTTTATGCTTGATTTGAAGGTGAAGGATTAGCTTTCCATATTTTTGCATTCCCCTCGTCATTTCTTTCTTTTGGTGTTTAAACTGATAAGCTCATCTGTGGTTTCCAGGGAGCAACAATTATTGATCAGTCGGTCACAATAGTACCTGAACCTGACTACGAGCTGCCTCCTACAGCTCTTGTGCCAATCAAGGTCTGTATAATTTATTTAGACATTCTGGTTTTTTTTCTACTGTTTGGTAGTCGCTAACACGATGTATACTCCTATACACACACACAGGCAACTGAGAGTGCTAATGCAGCTGGTGGTGGATCTGCTATTCAAAAGGCAGAAGATGTTGTGAGCAGCATGTTAGCAAAGGGCTTCATCCTGGGCAAGGATGCAGTTAACAAAGCCAAGACATTTGATGAGAAACACCAGTTCACATCCACTGCCTCTGCAAAAGTTGCTTCTTTAGACCAAAAGATTGGCCTTAGTGAGAAAATCAATTTGGGGGCAACGATTGTGAATGACAAAGTGAAAGAAATGGACCAGAAGTTCCATGTTTCTGAAAAGACAAAATCTGCTCTTGCAGCTGCTGAGCAGACGGTTAGCACTGCTGGATCTGCCATCATGAAGAACAGATATGTGTTGACAGGGGCATCTTGGGTTACTGGTGCTTTCAATAAGGTCACCAAGGCTGCAGGGGAAGTGGGCCAGAAGACGAAGGAAAAGATGGCAGAAGAACAACAGGCAAAAAATTCGGCTGAAGGTTATGTGCCTATACATGCTCTTTCAGAGTCCCCAAAAGCTTCCAAGACCGAGGAACCTACCAAGCCATCTTCACCTAAGGGATTAATCCTCTAGCTTATTCAAACAAATTTCATTAACTATTTTGCTATTTCGCTTCTCTCATCTTTTAGCGGGTCATTGTGTTATGTTAGATACTTAGATATGCTAGTTATATATAAAACGTCCTGTAAGTTTGATGCATAGAACGATAGTTGCTGAACCTTTGAATTCCTGTCAAATTCTCATCCTTATCGAACATTTGCATATGGATTGGTCATTTTGTCTTTTGGAAACAGGCAGCTACCTGAGGTTTTACTGTGACAATTTTACAATGGGCATGAACTTTGACCTGA

Download sequence region

Download sequence (5.6Kb)

Get flanking sequences on SL2.50ch03

mRNA Solyc03g097110.2.1

Ontology terms

terms associated with this mRNA

GO:0003676 – nucleic acid binding
GO:0000166 – nucleotide binding
GO:0055114 – oxidation-reduction process

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc03g097110.2.1	SL2.50ch03:59446297..59451466	279	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc03g097110.2	SL2.50ch03:59446020..59451661	5,642	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc03g097110.2.1.1	SL2.50ch03:59451461..59451661	201	-	n/a
exon	exon:Solyc03g097110.2.1.2	SL2.50ch03:59450054..59450157	104	-	1
exon	exon:Solyc03g097110.2.1.3	SL2.50ch03:59449704..59449779	76	-	n/a
exon	exon:Solyc03g097110.2.1.4	SL2.50ch03:59446952..59447035	84	-	n/a
exon	exon:Solyc03g097110.2.1.5	SL2.50ch03:59446020..59446864	845	-	n/a
intron	intron:Solyc03g097110.2.1.2	SL2.50ch03:59450158..59451460	n/a	-	n/a
intron	intron:Solyc03g097110.2.1.3	SL2.50ch03:59449780..59450053	n/a	-	n/a
intron	intron:Solyc03g097110.2.1.4	SL2.50ch03:59447036..59449703	n/a	-	n/a
intron	intron:Solyc03g097110.2.1.5	SL2.50ch03:59446865..59446951	n/a	-	n/a

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Related views

Genetic loci

Tomato locus Solyc03g097110

http%3A%2F%2Fwww.sgn.cornell.edu%3A8080%2Ffeature%2F17766483%2Fdetails feature 17766483

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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