Solanum lycopersicum mRNA Solyc04g008460.2.1
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Name | Type |
Length
808
|
Organism |
Description
Ribosomal protein L15 (AHRD V1 ***- B9GPA1_POPTR); contains Interpro domain(s) IPR000439 Ribosomal protein L15e
|
Location(s)
SL2.50ch04:2077830..2080111
|
Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005840
- Length
- 2282
![]() | spliced mRNA sequence, including UTRs |
>Solyc04g008460.2.1 Ribosomal protein L15 (AHRD V1 ***- B9GPA1_POPTR); contains Interpro domain(s) IPR000439 Ribosomal protein L15e
ATGGGTGCTTACACTTATGTGTCAGAGCTATGGAGAAAGAAACAGTCAGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAGCTCCCATCTATTGTCCGTGTCACCAGGCCTACCCGTCCTGACAAGGCACGCCGATTGGGTTACAAGGCCAAGCAGGGCTATGTGGTCTACCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCAGTGTCCAAGGGTATTGTGTATGGTAAACCCACCAACCAGGGAGTTACCCAACTCAAATTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAATTGGGTGGTCTTAGAGTCCTCAATTCTTACTGGATTAATGAGGATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAAGCCCATGCTGGTATTCGCAACGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAACTACGTGGTCTCACTTCAGCTGGTAAGAAATACAGAGGACTCCGCGGAAGAGGACATCTCCACCACAAAGCTCGCCCGTCAAGAAGGGCAACCTGGAAAAGGAACCAGACTCTATCTCTCCGCCGTTACCGTTGATCTGCTTGACCTTTTTGAGACATTATCGTTTTGCTTAATATTTTTGCATTATCTGGTTTTTAGCCTTTTATCTCGAGACATTCAGTTGTTTACAATTTTGAACAACTATTTCATGTTGTCAGCCTTGAGAAAGTTTACTGAATTAAAACAATAGATTGCAGCAAATTTTGTGTTGAAAGTGTGCATTTTCTTT
ATGGGTGCTTACACTTATGTGTCAGAGCTATGGAGAAAGAAACAGTCAGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAGCTCCCATCTATTGTCCGTGTCACCAGGCCTACCCGTCCTGACAAGGCACGCCGATTGGGTTACAAGGCCAAGCAGGGCTATGTGGTCTACCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCAGTGTCCAAGGGTATTGTGTATGGTAAACCCACCAACCAGGGAGTTACCCAACTCAAATTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAATTGGGTGGTCTTAGAGTCCTCAATTCTTACTGGATTAATGAGGATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAAGCCCATGCTGGTATTCGCAACGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAACTACGTGGTCTCACTTCAGCTGGTAAGAAATACAGAGGACTCCGCGGAAGAGGACATCTCCACCACAAAGCTCGCCCGTCAAGAAGGGCAACCTGGAAAAGGAACCAGACTCTATCTCTCCGCCGTTACCGTTGATCTGCTTGACCTTTTTGAGACATTATCGTTTTGCTTAATATTTTTGCATTATCTGGTTTTTAGCCTTTTATCTCGAGACATTCAGTTGTTTACAATTTTGAACAACTATTTCATGTTGTCAGCCTTGAGAAAGTTTACTGAATTAAAACAATAGATTGCAGCAAATTTTGTGTTGAAAGTGTGCATTTTCTTT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc04g008460.2.1 | SL2.50ch04:2077829..2079918 | 205 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc04g008460.2 | SL2.50ch04:2077830..2080111 | 2,282 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc04g008460.2.1.1 | SL2.50ch04:2077830..2077833 | 4 | + | n/a |
exon | exon:Solyc04g008460.2.1.2 | SL2.50ch04:2078716..2078882 | 167 | + | 2 |
exon | exon:Solyc04g008460.2.1.3 | SL2.50ch04:2079266..2079463 | 198 | + | n/a |
exon | exon:Solyc04g008460.2.1.4 | SL2.50ch04:2079673..2080111 | 439 | + | n/a |
intron | intron:Solyc04g008460.2.1.1 | SL2.50ch04:2077834..2078715 | n/a | + | n/a |
intron | intron:Solyc04g008460.2.1.2 | SL2.50ch04:2078883..2079265 | n/a | + | n/a |
intron | intron:Solyc04g008460.2.1.3 | SL2.50ch04:2079464..2079672 | n/a | + | n/a |
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