Solanum lycopersicum mRNA Solyc06g072280.2.1
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Name | Type |
Length
577
|
Organism |
Description
Small nuclear ribonucleoprotein E (AHRD V1 ***- B6SK95_MAIZE); contains Interpro domain(s) IPR006649 Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core
|
Location(s)
SL2.50ch06:44564152..44566407
|
Ontology term(s) |
GFF source
ITAG_eugene
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- Length
- 2256
- Sifter term
- GO:0005515
![]() | spliced mRNA sequence, including UTRs |
>Solyc06g072280.2.1 Small nuclear ribonucleoprotein E (AHRD V1 ***- B6SK95_MAIZE); contains Interpro domain(s) IPR006649 Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core
ATGGCTAGCACCAAAGTACAGAGGATTATGACCCAGCCCATTAATCTGATCTTCAGATTTCTTCAGAGTAAAGCTCGCATTCAGATATGGCTATTTGAGCAGAAGGATCAGAGGATTGAAGGACGTATTATTGGTTTTGATGAGTACATGAATTTGGTTCTAGATGATGCCGAGGAAGTCAATGTGAAGAAGAATAGCAGAAAGCAGTTAGGGCGGATTCTTCTGAAAGGAGATAATATCACATTGATGATGAACACGGGGAAATGATTTCCTGTTAGCTGGATCTTGAGAAGAAGTTCAATTTTCTGGCAAAAATCAACTATTGGAATGTCGTCTTTGTGGACAAGAAGCTGGATGTTAGATGCACATGATTGAGTTTGAACTTCCATTTATGTTTTGATATATGTATATTCAGCATGGTATGCTCAGATCTCTTTATACAGTGAAGAAGAGTAGCCTTATGACCATTTCTCTCTATGTTGGTAGTAACAATTATATCGCAGGTAAAGAATTGTGTTAACTCGAGAAATCAAGTGTTACTATGGATTTTTCATGTCTAATATGCTTTTTTAGGGTG
ATGGCTAGCACCAAAGTACAGAGGATTATGACCCAGCCCATTAATCTGATCTTCAGATTTCTTCAGAGTAAAGCTCGCATTCAGATATGGCTATTTGAGCAGAAGGATCAGAGGATTGAAGGACGTATTATTGGTTTTGATGAGTACATGAATTTGGTTCTAGATGATGCCGAGGAAGTCAATGTGAAGAAGAATAGCAGAAAGCAGTTAGGGCGGATTCTTCTGAAAGGAGATAATATCACATTGATGATGAACACGGGGAAATGATTTCCTGTTAGCTGGATCTTGAGAAGAAGTTCAATTTTCTGGCAAAAATCAACTATTGGAATGTCGTCTTTGTGGACAAGAAGCTGGATGTTAGATGCACATGATTGAGTTTGAACTTCCATTTATGTTTTGATATATGTATATTCAGCATGGTATGCTCAGATCTCTTTATACAGTGAAGAAGAGTAGCCTTATGACCATTTCTCTCTATGTTGGTAGTAACAATTATATCGCAGGTAAAGAATTGTGTTAACTCGAGAAATCAAGTGTTACTATGGATTTTTCATGTCTAATATGCTTTTTTAGGGTG
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc06g072280.2.1 | SL2.50ch06:44564151..44566097 | 89 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc06g072280.2 | SL2.50ch06:44564152..44566407 | 2,256 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc06g072280.2.1.1 | SL2.50ch06:44564152..44564193 | 42 | + | n/a |
exon | exon:Solyc06g072280.2.1.2 | SL2.50ch06:44564292..44564318 | 27 | + | n/a |
exon | exon:Solyc06g072280.2.1.3 | SL2.50ch06:44564440..44564502 | 63 | + | n/a |
exon | exon:Solyc06g072280.2.1.4 | SL2.50ch06:44565694..44565772 | 79 | + | n/a |
exon | exon:Solyc06g072280.2.1.5 | SL2.50ch06:44565888..44565933 | 46 | + | 2 |
exon | exon:Solyc06g072280.2.1.6 | SL2.50ch06:44566088..44566407 | 320 | + | 1 |
intron | intron:Solyc06g072280.2.1.1 | SL2.50ch06:44564194..44564291 | n/a | + | n/a |
intron | intron:Solyc06g072280.2.1.2 | SL2.50ch06:44564319..44564439 | n/a | + | n/a |
intron | intron:Solyc06g072280.2.1.3 | SL2.50ch06:44564503..44565693 | n/a | + | n/a |
intron | intron:Solyc06g072280.2.1.4 | SL2.50ch06:44565773..44565887 | n/a | + | n/a |
intron | intron:Solyc06g072280.2.1.5 | SL2.50ch06:44565934..44566087 | n/a | + | n/a |
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