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Potato locus Ve resistance 1
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
Accession name:
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Alleles (0) | None | [Add new Allele] |
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Associated loci - graphical view | None |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400006255 PGSC_DMv3_219_ch09:9493033..9496569
AAAAAATTTATTTCTCTCTTTCATGAATGAAGCAAGACCAAAGAGGAGGACTTCCACAAGTCAGTCTTCCACAGAATGAACCAAAAGGGATAACATCAAACAAGTAAAAGGAGTTAATTCAATCTGTACAAACGCGTAGTTTTCTTTGACATTTCCCAATAACCCTTCTCCTTATTAAGTTCCTTCTAACTGCGTACTTTAGTCATATTCAAGCTAACAAGTTGCATGAATATGACAACTCTCTACTTTCTATGGCTTTTCTTGATTCCCTTGTTTCAAATCTTATCAGGATATCACATTTTCTTGGTTTCCTCTCAATGTTTTCACGATCAAAAGTCGTTGTTGCTACAGTTGAAGGGCAGCCTTCAGTATGATTCTACTTTGTCAAATGAATTGGCAAAATGGAACGAGAAGACAAGTGAATGTTGCAATTGGGATGGAGTTAAATGTGATCTCTCTGGTCATGTGATTGCCTTGGAACTGGATAATCAGACTATTTCTAGTGGAATTGAGAATTCAAGTGCTCTTTTCAGTCTTCAGTATCTTGAGAGGCTAAATTTGGCTTACAACAGGTTCAGTGTTGGCATACCAGTTGGTATAGCCAACCTCACGAACTTGAAGTACCTGAATTTATCCAATGCTGGTTTTGTGGGGCAAATTCGTATGATGTTATCAAGATTAACAAAGCCAGTTACTCTAGATCTCTCAACTCTTTTCCCTTACTCTGACCAGACACTAAAACTTGAGAATTCCAATTTGAGACATTTCATTGACAACTCAACAGAGCTTAGAGAGCTTTACCTGGATGGGGTTGATCTTTCATCTCAGAGGACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTTACTTGACCGTCTTGAGTTTGCATGCTTGTCAAATTTCAGGCCCTATTGATGAATCACTTTCTAAGCTTCAGATTCTCTCTATCATCCGTCTTGACCAGAACAATCTCTCTACCACAGTTCCAGGATATTTTGCCAATTTCACAATCTTGACTACCTTGTCCCTCGACTCTTGTAATCTGCAAGGAGCTTTTCCTAAAAAGATCTTTCAGGTACAAGTTTTAGAGATTTTGGACTTTCAAATAACAAGCTGCTTAGTGGTAGTATTCCGAGTTTTCCTCGAAATGGATCTTTGAGGACGATATCACTAAGCAACACCAACTTTTTGGGTTCATTACCAGAGTCCATTTCGAACCTTCAGAACCTGTCCAGGTTAGAGCTCTCCAATTGCAATTTCACTGGACAGTACCTTCAACAATGGCAAACCTTATCAATCTTGTTCATTTGGACTTCTCTTTGAACAACTTCACTGGTTCTATCCCATATTTCCATAAATCCAAGAAACTCGCCCACTTAGACCTATCTCGTAATGGTTTAACTGGTTTCCTCTCCCCGACTCATTTTGAAGGACTCTCAGAGCTTGTCTACAGATATTTAGGGAACAACTTACTCAACGGGATCATTCCTGAATGTATCTTTGAGCTCCCCTCCTTGCAGACGCTTTTACTTAACAGCAATCAATTTGTTGGCCAAGTCAACGATTTTCACAATGCATCCTCCTCTCTGTATGTAATCGATTTGAGCAATAACCACCTGAATGGTTCAATTCCCAAGTCCATGTTTGAAATAGGGATGCTTAAGGTCCTCTCATTGTCTTCCAACTTCTTTAGTGGGACAGTTCCACCTTGACCTCATAGGGAGGCTGAGTAATCTTACAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGCATCAACTCCACCTCTTTCATATTTCCCCAGTTGAGATTATTGAAACTAGCTTCTTGTCGGTTGCAAAAGTTTCCTGATCTTAAAAGTCAGTCAAGGATGATCCACTTAGATCTTTCTGACAACCAAATACGGGGGGCAATACCAAATTGGATTTGGGGAATTGGTAGTGGAAATCTGGCTCACCTGAATCTTTCCTTCAATCAGCTGGAGTACGCAGAACAGCCATACAATGTTTCCAGCTATCTTGTAGTCTTGGACTTTCATTCCAATAAGCTAAAGGGTGACATACCAATTCCACCTTCCTGTGCTGCATATTTGGACTACTCGAGCAATAATTTCAGCAATTCCATCCTACTAGATATTGGCAATTATCTTGGTATATTTCTCTCACTTGCAAATAATCGGCTCGCAGGAAGAATTCCTGAATCTATATGCAATGCCAGCTACCTTCAAGTTCTTGATTTCTCTAACAATGCCTTGAGTGGAACAATCCCACCATGTCTACTGGAATATAGTACAAATCATGGAGTGCTGAATCTAGGTAACAATAAACTCAATGGCGTCATACCAGATTCATTTCCAATTGGTTATGCTCTACAAACTTTAGACGTCAGTGAGAATAAGTTACAAGGTAGGCTGCCAAAATCGCTTGTGAACTGCAAGTTGTTGGAGGTCCTGAATGTTGGAAATAACAAACTTGTTGATCGTTTCCCATGCATGTTGAGGAACTCAAATAGTCTGAGGGTTCTAGTTTTGCGTTCCAATCAATTCAATGGAAGTGTTCAGTGTGATGCAACCAGGAATAACTGGAAAAATCTCCAGATCATAGATATAGCTTCCAACAACTTCACTGGTGTGTTGAATGCAGAATTCTTTTCAAATTTGAAAGGAATGATGGTTGCAGATGATTACGTGGAGACAGGACGCAATCATATCCAGTACAAGTTTCTCCAACTAAGTAACTTATACTATCAGGACACAGTGATAATAACCATCAAAGGGCTAGAGTGGGAGCTTGTGAAAATTCTCAGGGTCTACACAGCTATTGATTTCTCTTCAAATAGATTTCAAGGAGTGATACCAGATACTATTGGGAATCTTAGCTCACTCTATGTTCTGAACCTATCACACAATGCCCTTGAAGGACCAATTCCAAAATTGATTGGGAAGCTACAAATGCTTGAATCACTAGACCTGTCAACAAACCACCTATCCGGGGAGATCCCATCAGAGCTTGCAAGTTTCACATTCTTAGCAGCTTTGAACTTATCGTTCAACAAATTGTTTGGCAAAATCCCATCGACTAATCAGTTTCAAACATTCTCAGCAGATTCCTTTGAAGGAAACAGTGGCCTATGCGGGCTCCCTCTCAACAACAGTTGTCAAAGCAATGGCTCAGAGTCCCTGCCTCCACCAACTTCGCTACCAGACTCAGATGATGAATGGAAGTTCATTTTCGCAGCTGTTGGATACGTAGTAGGGGCAGCAAACACCATTTCACTTCTGTGGTTTTACGAACCAGTGAAGAAATGGTTTGATAAGCATACGGAGAAATGCTTGCTTTGGTTTTCAAGAAAGTGATCCTTAAACCCATAAATGATGAGTTTATTTAATCCTTGCTTTGTTTAAATAAACACCAGGATCCAAATTCAAGTCAGTTTGTTATTTCCCTTGATGAATGTATACAATTTTCTACTATCAGAAACAGCACCCACTTTTGGATTAAATAGCTTCCCACATTGCCTGCAAC
AAAAAATTTATTTCTCTCTTTCATGAATGAAGCAAGACCAAAGAGGAGGACTTCCACAAGTCAGTCTTCCACAGAATGAACCAAAAGGGATAACATCAAACAAGTAAAAGGAGTTAATTCAATCTGTACAAACGCGTAGTTTTCTTTGACATTTCCCAATAACCCTTCTCCTTATTAAGTTCCTTCTAACTGCGTACTTTAGTCATATTCAAGCTAACAAGTTGCATGAATATGACAACTCTCTACTTTCTATGGCTTTTCTTGATTCCCTTGTTTCAAATCTTATCAGGATATCACATTTTCTTGGTTTCCTCTCAATGTTTTCACGATCAAAAGTCGTTGTTGCTACAGTTGAAGGGCAGCCTTCAGTATGATTCTACTTTGTCAAATGAATTGGCAAAATGGAACGAGAAGACAAGTGAATGTTGCAATTGGGATGGAGTTAAATGTGATCTCTCTGGTCATGTGATTGCCTTGGAACTGGATAATCAGACTATTTCTAGTGGAATTGAGAATTCAAGTGCTCTTTTCAGTCTTCAGTATCTTGAGAGGCTAAATTTGGCTTACAACAGGTTCAGTGTTGGCATACCAGTTGGTATAGCCAACCTCACGAACTTGAAGTACCTGAATTTATCCAATGCTGGTTTTGTGGGGCAAATTCGTATGATGTTATCAAGATTAACAAAGCCAGTTACTCTAGATCTCTCAACTCTTTTCCCTTACTCTGACCAGACACTAAAACTTGAGAATTCCAATTTGAGACATTTCATTGACAACTCAACAGAGCTTAGAGAGCTTTACCTGGATGGGGTTGATCTTTCATCTCAGAGGACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTTACTTGACCGTCTTGAGTTTGCATGCTTGTCAAATTTCAGGCCCTATTGATGAATCACTTTCTAAGCTTCAGATTCTCTCTATCATCCGTCTTGACCAGAACAATCTCTCTACCACAGTTCCAGGATATTTTGCCAATTTCACAATCTTGACTACCTTGTCCCTCGACTCTTGTAATCTGCAAGGAGCTTTTCCTAAAAAGATCTTTCAGGTACAAGTTTTAGAGATTTTGGACTTTCAAATAACAAGCTGCTTAGTGGTAGTATTCCGAGTTTTCCTCGAAATGGATCTTTGAGGACGATATCACTAAGCAACACCAACTTTTTGGGTTCATTACCAGAGTCCATTTCGAACCTTCAGAACCTGTCCAGGTTAGAGCTCTCCAATTGCAATTTCACTGGACAGTACCTTCAACAATGGCAAACCTTATCAATCTTGTTCATTTGGACTTCTCTTTGAACAACTTCACTGGTTCTATCCCATATTTCCATAAATCCAAGAAACTCGCCCACTTAGACCTATCTCGTAATGGTTTAACTGGTTTCCTCTCCCCGACTCATTTTGAAGGACTCTCAGAGCTTGTCTACAGATATTTAGGGAACAACTTACTCAACGGGATCATTCCTGAATGTATCTTTGAGCTCCCCTCCTTGCAGACGCTTTTACTTAACAGCAATCAATTTGTTGGCCAAGTCAACGATTTTCACAATGCATCCTCCTCTCTGTATGTAATCGATTTGAGCAATAACCACCTGAATGGTTCAATTCCCAAGTCCATGTTTGAAATAGGGATGCTTAAGGTCCTCTCATTGTCTTCCAACTTCTTTAGTGGGACAGTTCCACCTTGACCTCATAGGGAGGCTGAGTAATCTTACAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGCATCAACTCCACCTCTTTCATATTTCCCCAGTTGAGATTATTGAAACTAGCTTCTTGTCGGTTGCAAAAGTTTCCTGATCTTAAAAGTCAGTCAAGGATGATCCACTTAGATCTTTCTGACAACCAAATACGGGGGGCAATACCAAATTGGATTTGGGGAATTGGTAGTGGAAATCTGGCTCACCTGAATCTTTCCTTCAATCAGCTGGAGTACGCAGAACAGCCATACAATGTTTCCAGCTATCTTGTAGTCTTGGACTTTCATTCCAATAAGCTAAAGGGTGACATACCAATTCCACCTTCCTGTGCTGCATATTTGGACTACTCGAGCAATAATTTCAGCAATTCCATCCTACTAGATATTGGCAATTATCTTGGTATATTTCTCTCACTTGCAAATAATCGGCTCGCAGGAAGAATTCCTGAATCTATATGCAATGCCAGCTACCTTCAAGTTCTTGATTTCTCTAACAATGCCTTGAGTGGAACAATCCCACCATGTCTACTGGAATATAGTACAAATCATGGAGTGCTGAATCTAGGTAACAATAAACTCAATGGCGTCATACCAGATTCATTTCCAATTGGTTATGCTCTACAAACTTTAGACGTCAGTGAGAATAAGTTACAAGGTAGGCTGCCAAAATCGCTTGTGAACTGCAAGTTGTTGGAGGTCCTGAATGTTGGAAATAACAAACTTGTTGATCGTTTCCCATGCATGTTGAGGAACTCAAATAGTCTGAGGGTTCTAGTTTTGCGTTCCAATCAATTCAATGGAAGTGTTCAGTGTGATGCAACCAGGAATAACTGGAAAAATCTCCAGATCATAGATATAGCTTCCAACAACTTCACTGGTGTGTTGAATGCAGAATTCTTTTCAAATTTGAAAGGAATGATGGTTGCAGATGATTACGTGGAGACAGGACGCAATCATATCCAGTACAAGTTTCTCCAACTAAGTAACTTATACTATCAGGACACAGTGATAATAACCATCAAAGGGCTAGAGTGGGAGCTTGTGAAAATTCTCAGGGTCTACACAGCTATTGATTTCTCTTCAAATAGATTTCAAGGAGTGATACCAGATACTATTGGGAATCTTAGCTCACTCTATGTTCTGAACCTATCACACAATGCCCTTGAAGGACCAATTCCAAAATTGATTGGGAAGCTACAAATGCTTGAATCACTAGACCTGTCAACAAACCACCTATCCGGGGAGATCCCATCAGAGCTTGCAAGTTTCACATTCTTAGCAGCTTTGAACTTATCGTTCAACAAATTGTTTGGCAAAATCCCATCGACTAATCAGTTTCAAACATTCTCAGCAGATTCCTTTGAAGGAAACAGTGGCCTATGCGGGCTCCCTCTCAACAACAGTTGTCAAAGCAATGGCTCAGAGTCCCTGCCTCCACCAACTTCGCTACCAGACTCAGATGATGAATGGAAGTTCATTTTCGCAGCTGTTGGATACGTAGTAGGGGCAGCAAACACCATTTCACTTCTGTGGTTTTACGAACCAGTGAAGAAATGGTTTGATAAGCATACGGAGAAATGCTTGCTTTGGTTTTCAAGAAAGTGATCCTTAAACCCATAAATGATGAGTTTATTTAATCCTTGCTTTGTTTAAATAAACACCAGGATCCAAATTCAAGTCAGTTTGTTATTTCCCTTGATGAATGTATACAATTTTCTACTATCAGAAACAGCACCCACTTTTGGATTAAATAGCTTCCCACATTGCCTGCAAC
Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch09
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Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400015994 Verticillium wilt disease resistance protein
AAAAAATTTATTTCTCTCTTTCATGAATGAAGCAAGACCAAAGAGGAGGACTTCCACAAGTCAGTCTTCCACAGAATGAACCAAAAGGGATAACATCAAACAAGTAAAAGGAGTTAATTCAATCTGTACAAACGCGTAGTTTTCTTTGACATTTCCCAATAACCCTTCTCCTTATTAAGTTCCTTCTAACTGCGTACTTTAGTCATATTCAAGCTAACAAGTTGCATGAATATGACAACTCTCTACTTTCTATGGCTTTTCTTGATTCCCTTGTTTCAAATCTTATCAGGATATCACATTTTCTTGGTTTCCTCTCAATGTTTTCACGATCAAAAGTCGTTGTTGCTACAGTTGAAGGGCAGCCTTCAGTATGATTCTACTTTGTCAAATGAATTGGCAAAATGGAACGAGAAGACAAGTGAATGTTGCAATTGGGATGGAGTTAAATGTGATCTCTCTGGTCATGTGATTGCCTTGGAACTGGATAATCAGACTATTTCTAGTGGAATTGAGAATTCAAGTGCTCTTTTCAGTCTTCAGTATCTTGAGAGGCTAAATTTGGCTTACAACAGGTTCAGTGTTGGCATACCAGTTGGTATAGCCAACCTCACGAACTTGAAGTACCTGAATTTATCCAATGCTGGTTTTGTGGGGCAAATTCGTATGATGTTATCAAGATTAACAAAGCCAGTTACTCTAGATCTCTCAACTCTTTTCCCTTACTCTGACCAGACACTAAAACTTGAGAATTCCAATTTGAGACATTTCATTGACAACTCAACAGAGCTTAGAGAGCTTTACCTGGATGGGGTTGATCTTTCATCTCAGAGGACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTTACTTGACCGTCTTGAGTTTGCATGCTTGTCAAATTTCAGGCCCTATTGATGAATCACTTTCTAAGCTTCAGATTCTCTCTATCATCCGTCTTGACCAGAACAATCTCTCTACCACAGTTCCAGGATATTTTGCCAATTTCACAATCTTGACTACCTTGTCCCTCGACTCTTGTAATCTGCAAGGAGCTTTTCCTAAAAAGATCTTTCAGGTACAAGTTTTAGAGATTTTGGACTTTCAAATAACAAGCTGCTTAGTGGTAGTATTCCGAGTTTTCCTCGAAATGGATCTTTGAGGACGATATCACTAAGCAACACCAACTTTTTGGGTTCATTACCAGAGTCCATTTCGAACCTTCAGAACCTGTCCAGGTTAGAGCTCTCCAATTGCAATTTCACTGGACAGTACCTTCAACAATGGCAAACCTTATCAATCTTGTTCATTTGGACTTCTCTTTGAACAACTTCACTGGTTCTATCCCATATTTCCATAAATCCAAGAAACTCGCCCACTTAGACCTATCTCGTAATGGTTTAACTGGTTTCCTCTCCCCGACTCATTTTGAAGGACTCTCAGAGCTTGTCTACAGATATTTAGGGAACAACTTACTCAACGGGATCATTCCTGAATGTATCTTTGAGCTCCCCTCCTTGCAGACGCTTTTACTTAACAGCAATCAATTTGTTGGCCAAGTCAACGATTTTCACAATGCATCCTCCTCTCTGTATGTAATCGATTTGAGCAATAACCACCTGAATGGTTCAATTCCCAAGTCCATGTTTGAAATAGGGATGCTTAAGGTCCTCTCATTGTCTTCCAACTTCTTTAGTGGGACAGTTCCACCTTGACCTCATAGGGAGGCTGAGTAATCTTACAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGCATCAACTCCACCTCTTTCATATTTCCCCAGTTGAGATTATTGAAACTAGCTTCTTGTCGGTTGCAAAAGTTTCCTGATCTTAAAAGTCAGTCAAGGATGATCCACTTAGATCTTTCTGACAACCAAATACGGGGGGCAATACCAAATTGGATTTGGGGAATTGGTAGTGGAAATCTGGCTCACCTGAATCTTTCCTTCAATCAGCTGGAGTACGCAGAACAGCCATACAATGTTTCCAGCTATCTTGTAGTCTTGGACTTTCATTCCAATAAGCTAAAGGGTGACATACCAATTCCACCTTCCTGTGCTGCATATTTGGACTACTCGAGCAATAATTTCAGCAATTCCATCCTACTAGATATTGGCAATTATCTTGGTATATTTCTCTCACTTGCAAATAATCGGCTCGCAGGAAGAATTCCTGAATCTATATGCAATGCCAGCTACCTTCAAGTTCTTGATTTCTCTAACAATGCCTTGAGTGGAACAATCCCACCATGTCTACTGGAATATAGTACAAATCATGGAGTGCTGAATCTAGGTAACAATAAACTCAATGGCGTCATACCAGATTCATTTCCAATTGGTTATGCTCTACAAACTTTAGACGTCAGTGAGAATAAGTTACAAGGTAGGCTGCCAAAATCGCTTGTGAACTGCAAGTTGTTGGAGGTCCTGAATGTTGGAAATAACAAACTTGTTGATCGTTTCCCATGCATGTTGAGGAACTCAAATAGTCTGAGGGTTCTAGTTTTGCGTTCCAATCAATTCAATGGAAGTGTTCAGTGTGATGCAACCAGGAATAACTGGAAAAATCTCCAGATCATAGATATAGCTTCCAACAACTTCACTGGTGTGTTGAATGCAGAATTCTTTTCAAATTTGAAAGGAATGATGGTTGCAGATGATTACGTGGAGACAGGACGCAATCATATCCAGTACAAGTTTCTCCAACTAAGTAACTTATACTATCAGGACACAGTGATAATAACCATCAAAGGGCTAGAGTGGGAGCTTGTGAAAATTCTCAGGGTCTACACAGCTATTGATTTCTCTTCAAATAGATTTCAAGGAGTGATACCAGATACTATTGGGAATCTTAGCTCACTCTATGTTCTGAACCTATCACACAATGCCCTTGAAGGACCAATTCCAAAATTGATTGGGAAGCTACAAATGCTTGAATCACTAGACCTGTCAACAAACCACCTATCCGGGGAGATCCCATCAGAGCTTGCAAGTTTCACATTCTTAGCAGCTTTGAACTTATCGTTCAACAAATTGTTTGGCAAAATCCCATCGACTAATCAGTTTCAAACATTCTCAGCAGATTCCTTTGAAGGAAACAGTGGCCTATGCGGGCTCCCTCTCAACAACAGTTGTCAAAGCAATGGCTCAGAGTCCCTGCCTCCACCAACTTCGCTACCAGACTCAGATGATGAATGGAAGTTCATTTTCGCAGCTGTTGGATACGTAGTAGGGGCAGCAAACACCATTTCACTTCTGTGGTTTTACGAACCAGTGAAGAAATGGTTTGATAAGCATACGGAGAAATGCTTGCTTTGGTTTTCAAGAAAGTGATCCTTAAACCCATAAATGATGAGTTTATTTAATCCTTGCTTTGTTTAAATAAACACCAGGATCCAAATTCAAGTCAGTTTGTTATTTCCCTTGATGAATGTATACAATTTTCTACTATCAGAAACAGCACCCACTTTTGGATTAAATAGCTTCCCACATTGCCTGCAAC
AAAAAATTTATTTCTCTCTTTCATGAATGAAGCAAGACCAAAGAGGAGGACTTCCACAAGTCAGTCTTCCACAGAATGAACCAAAAGGGATAACATCAAACAAGTAAAAGGAGTTAATTCAATCTGTACAAACGCGTAGTTTTCTTTGACATTTCCCAATAACCCTTCTCCTTATTAAGTTCCTTCTAACTGCGTACTTTAGTCATATTCAAGCTAACAAGTTGCATGAATATGACAACTCTCTACTTTCTATGGCTTTTCTTGATTCCCTTGTTTCAAATCTTATCAGGATATCACATTTTCTTGGTTTCCTCTCAATGTTTTCACGATCAAAAGTCGTTGTTGCTACAGTTGAAGGGCAGCCTTCAGTATGATTCTACTTTGTCAAATGAATTGGCAAAATGGAACGAGAAGACAAGTGAATGTTGCAATTGGGATGGAGTTAAATGTGATCTCTCTGGTCATGTGATTGCCTTGGAACTGGATAATCAGACTATTTCTAGTGGAATTGAGAATTCAAGTGCTCTTTTCAGTCTTCAGTATCTTGAGAGGCTAAATTTGGCTTACAACAGGTTCAGTGTTGGCATACCAGTTGGTATAGCCAACCTCACGAACTTGAAGTACCTGAATTTATCCAATGCTGGTTTTGTGGGGCAAATTCGTATGATGTTATCAAGATTAACAAAGCCAGTTACTCTAGATCTCTCAACTCTTTTCCCTTACTCTGACCAGACACTAAAACTTGAGAATTCCAATTTGAGACATTTCATTGACAACTCAACAGAGCTTAGAGAGCTTTACCTGGATGGGGTTGATCTTTCATCTCAGAGGACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTTACTTGACCGTCTTGAGTTTGCATGCTTGTCAAATTTCAGGCCCTATTGATGAATCACTTTCTAAGCTTCAGATTCTCTCTATCATCCGTCTTGACCAGAACAATCTCTCTACCACAGTTCCAGGATATTTTGCCAATTTCACAATCTTGACTACCTTGTCCCTCGACTCTTGTAATCTGCAAGGAGCTTTTCCTAAAAAGATCTTTCAGGTACAAGTTTTAGAGATTTTGGACTTTCAAATAACAAGCTGCTTAGTGGTAGTATTCCGAGTTTTCCTCGAAATGGATCTTTGAGGACGATATCACTAAGCAACACCAACTTTTTGGGTTCATTACCAGAGTCCATTTCGAACCTTCAGAACCTGTCCAGGTTAGAGCTCTCCAATTGCAATTTCACTGGACAGTACCTTCAACAATGGCAAACCTTATCAATCTTGTTCATTTGGACTTCTCTTTGAACAACTTCACTGGTTCTATCCCATATTTCCATAAATCCAAGAAACTCGCCCACTTAGACCTATCTCGTAATGGTTTAACTGGTTTCCTCTCCCCGACTCATTTTGAAGGACTCTCAGAGCTTGTCTACAGATATTTAGGGAACAACTTACTCAACGGGATCATTCCTGAATGTATCTTTGAGCTCCCCTCCTTGCAGACGCTTTTACTTAACAGCAATCAATTTGTTGGCCAAGTCAACGATTTTCACAATGCATCCTCCTCTCTGTATGTAATCGATTTGAGCAATAACCACCTGAATGGTTCAATTCCCAAGTCCATGTTTGAAATAGGGATGCTTAAGGTCCTCTCATTGTCTTCCAACTTCTTTAGTGGGACAGTTCCACCTTGACCTCATAGGGAGGCTGAGTAATCTTACAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGCATCAACTCCACCTCTTTCATATTTCCCCAGTTGAGATTATTGAAACTAGCTTCTTGTCGGTTGCAAAAGTTTCCTGATCTTAAAAGTCAGTCAAGGATGATCCACTTAGATCTTTCTGACAACCAAATACGGGGGGCAATACCAAATTGGATTTGGGGAATTGGTAGTGGAAATCTGGCTCACCTGAATCTTTCCTTCAATCAGCTGGAGTACGCAGAACAGCCATACAATGTTTCCAGCTATCTTGTAGTCTTGGACTTTCATTCCAATAAGCTAAAGGGTGACATACCAATTCCACCTTCCTGTGCTGCATATTTGGACTACTCGAGCAATAATTTCAGCAATTCCATCCTACTAGATATTGGCAATTATCTTGGTATATTTCTCTCACTTGCAAATAATCGGCTCGCAGGAAGAATTCCTGAATCTATATGCAATGCCAGCTACCTTCAAGTTCTTGATTTCTCTAACAATGCCTTGAGTGGAACAATCCCACCATGTCTACTGGAATATAGTACAAATCATGGAGTGCTGAATCTAGGTAACAATAAACTCAATGGCGTCATACCAGATTCATTTCCAATTGGTTATGCTCTACAAACTTTAGACGTCAGTGAGAATAAGTTACAAGGTAGGCTGCCAAAATCGCTTGTGAACTGCAAGTTGTTGGAGGTCCTGAATGTTGGAAATAACAAACTTGTTGATCGTTTCCCATGCATGTTGAGGAACTCAAATAGTCTGAGGGTTCTAGTTTTGCGTTCCAATCAATTCAATGGAAGTGTTCAGTGTGATGCAACCAGGAATAACTGGAAAAATCTCCAGATCATAGATATAGCTTCCAACAACTTCACTGGTGTGTTGAATGCAGAATTCTTTTCAAATTTGAAAGGAATGATGGTTGCAGATGATTACGTGGAGACAGGACGCAATCATATCCAGTACAAGTTTCTCCAACTAAGTAACTTATACTATCAGGACACAGTGATAATAACCATCAAAGGGCTAGAGTGGGAGCTTGTGAAAATTCTCAGGGTCTACACAGCTATTGATTTCTCTTCAAATAGATTTCAAGGAGTGATACCAGATACTATTGGGAATCTTAGCTCACTCTATGTTCTGAACCTATCACACAATGCCCTTGAAGGACCAATTCCAAAATTGATTGGGAAGCTACAAATGCTTGAATCACTAGACCTGTCAACAAACCACCTATCCGGGGAGATCCCATCAGAGCTTGCAAGTTTCACATTCTTAGCAGCTTTGAACTTATCGTTCAACAAATTGTTTGGCAAAATCCCATCGACTAATCAGTTTCAAACATTCTCAGCAGATTCCTTTGAAGGAAACAGTGGCCTATGCGGGCTCCCTCTCAACAACAGTTGTCAAAGCAATGGCTCAGAGTCCCTGCCTCCACCAACTTCGCTACCAGACTCAGATGATGAATGGAAGTTCATTTTCGCAGCTGTTGGATACGTAGTAGGGGCAGCAAACACCATTTCACTTCTGTGGTTTTACGAACCAGTGAAGAAATGGTTTGATAAGCATACGGAGAAATGCTTGCTTTGGTTTTCAAGAAAGTGATCCTTAAACCCATAAATGATGAGTTTATTTAATCCTTGCTTTGTTTAAATAAACACCAGGATCCAAATTCAAGTCAGTTTGTTATTTCCCTTGATGAATGTATACAATTTTCTACTATCAGAAACAGCACCCACTTTTGGATTAAATAGCTTCCCACATTGCCTGCAAC
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400015994 Verticillium wilt disease resistance protein
MIHLDLSDNQIRGAIPNWIWGIGSGNLAHLNLSFNQLEYAEQPYNVSSYLVVLDFHSNKLKGDIPIPPSCAAYLDYSSNNFSNSILLDIGNYLGIFLSLANNRLAGRIPESICNASYLQVLDFSNNALSGTIPPCLLEYSTNHGVLNLGNNKLNGVIPDSFPIGYALQTLDVSENKLQGRLPKSLVNCKLLEVLNVGNNKLVDRFPCMLRNSNSLRVLVLRSNQFNGSVQCDATRNNWKNLQIIDIASNNFTGVLNAEFFSNLKGMMVADDYVETGRNHIQYKFLQLSNLYYQDTVIITIKGLEWELVKILRVYTAIDFSSNRFQGVIPDTIGNLSSLYVLNLSHNALEGPIPKLIGKLQMLESLDLSTNHLSGEIPSELASFTFLAALNLSFNKLFGKIPSTNQFQTFSADSFEGNSGLCGLPLNNSCQSNGSESLPPPTSLPDSDDEWKFIFAAVGYVVGAANTISLLWFYEPVKKWFDKHTEKCLLWFSRK*
MIHLDLSDNQIRGAIPNWIWGIGSGNLAHLNLSFNQLEYAEQPYNVSSYLVVLDFHSNKLKGDIPIPPSCAAYLDYSSNNFSNSILLDIGNYLGIFLSLANNRLAGRIPESICNASYLQVLDFSNNALSGTIPPCLLEYSTNHGVLNLGNNKLNGVIPDSFPIGYALQTLDVSENKLQGRLPKSLVNCKLLEVLNVGNNKLVDRFPCMLRNSNSLRVLVLRSNQFNGSVQCDATRNNWKNLQIIDIASNNFTGVLNAEFFSNLKGMMVADDYVETGRNHIQYKFLQLSNLYYQDTVIITIKGLEWELVKILRVYTAIDFSSNRFQGVIPDTIGNLSSLYVLNLSHNALEGPIPKLIGKLQMLESLDLSTNHLSGEIPSELASFTFLAALNLSFNKLFGKIPSTNQFQTFSADSFEGNSGLCGLPLNNSCQSNGSESLPPPTSLPDSDDEWKFIFAAVGYVVGAANTISLLWFYEPVKKWFDKHTEKCLLWFSRK*
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![]() ![]() | [Associate new unigene] |
Unigene ID:
[loading...]
![]() ![]() | [Associate new genbank sequence] |
AY059426 Solanum tuberosum clone StVe1-01 Ve resistance gene analog gene, partial cds.
AF466617 Solanum tuberosum clone StVe1-02e Ve resistance gene analog gene, partial cds.
AF467244 Solanum tuberosum clone StVe1-02f Ve resistance gene analog gene, partial cds.
AF467245 Solanum tuberosum clone StVe1-02g Ve resistance gene analog gene, partial cds.
AY212938 Solanum tuberosum clone StVe1-02i Ve resistance gene-like protein gene, partial cds.
AY212939 Solanum tuberosum clone StVe1-02j Ve resistance gene-like protein gene, partial cds.
AY212940 Solanum tuberosum clone StVe1-02k Ve resistance gene-like protein gene, partial cds.
AY212941 Solanum tuberosum clone StVe1-02l Ve resistance gene-like protein gene, partial cds.
AF466617 Solanum tuberosum clone StVe1-02e Ve resistance gene analog gene, partial cds.
AF467244 Solanum tuberosum clone StVe1-02f Ve resistance gene analog gene, partial cds.
AF467245 Solanum tuberosum clone StVe1-02g Ve resistance gene analog gene, partial cds.
AY212938 Solanum tuberosum clone StVe1-02i Ve resistance gene-like protein gene, partial cds.
AY212939 Solanum tuberosum clone StVe1-02j Ve resistance gene-like protein gene, partial cds.
AY212940 Solanum tuberosum clone StVe1-02k Ve resistance gene-like protein gene, partial cds.
AY212941 Solanum tuberosum clone StVe1-02l Ve resistance gene-like protein gene, partial cds.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Linkage disequilibrium mapping of a Verticillium dahliae resistance quantitative trait locus in tetraploid potato ( Solanum tuberosum) through a candidate gene approach.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik (2004)
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We have used the linkage disequilibrium mapping method to test for an association between a candidate gene marker and resistance to Verticillium dahliae in tetraploid potato. A probe derived from the tomato Verticillium resistance gene ( Ve1) identified homologous sequences ( StVe1) in potato, which in a diploid population map to chromosome 9, in a position analogous to that of the tomato resistance gene. When a molecular marker closely linked (1.5 cM) to the homologues was used as a candidate gene marker on 137 tetraploid potato genotypes (mostly North American cultivars), the association between the marker and resistance was confirmed ( P<0.001). The amount of phenotypic variation in resistance explained by the allele of the STM1051 marker was greater than 10% and 25% in two subpopulations that were inferred from coancestry data matrix. Cloning of homologues from the highly resistant potato cv. Reddale indicates that the resistance quantitative trait locus (QTL) comprises at least an eleven-member family, encoding plant-specific leucine-rich repeat proteins highly similar to the tomato Ve genes. The sequence analysis shows that all homologues are uninterrupted open reading frames and thus represent putative functional resistance genes. This is the first time that the linkage disequilibrium method has been used to find an association between a resistance gene and a candidate gene marker in tetraploid potato. We have shown that it is possible to map QTL directly on already available potato cultivars, without developing a new mapping population.
Simko, I. Costanzo, S. Haynes, KG. Christ, BJ. Jones, RW.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik.
2004.
108(2).
217-24.
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