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Tomato locus Cul1
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
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![]() ![]() | [Associate new locus] |
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Associated loci - graphical view | None |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc06g084520.2 SL2.50ch06:49606870..49600280 (sequence from reverse strand)
TCTTTGGTAAAAAATAAATAAATAAAAAATAGTAAGAGTATATTTTGCAAGTTCTTCTCGTCTGCCCTAGCTCGCTCGCTCCTCTTCCGCGATCTCCTCGTGTTTTCTGCAACCAAACTGCTGTACGTTTGTTTATGTTTCTCTCTTTCGTGTTTTTTTTCATCTCCAGAGCCCTTTTATCCATTCCGTCTCTATCTCTAATTCCATCCAAACCCTAACCCTATCGAATTGTAAATTAATGCTTAATTTTTTTTTCTGTAATATATATATATATATCCCGCTTTCATCCCATCCTGTTTATGATTGATTGGTGGTAGGAGTGTATGCTGCTTCTTTTGGGTTTTGGGGCCTAAGAATTCATTGTGATTTTTCTTAAATCAATTGCTCGCATATTGTAGTTTCATGTGAATGTGATCAATAGGTTGTTTCTCCGAGTGTGATTTGATTTTACAAATTCAAGCTAATGTTGCTCATTTGCAGTTTGTGTTTATGACGACTAGCCAGATGAAGACAATCGAGCTGGAGGAAGGATGGAACTTCATGCAGAAGGGAATCACAAAATTAAAGAAAATCTTAGAAGGCCATCCAGATTCATTCAGCTCCGAAGAGTACATGATGCTCTACACGTATCCATAACATTCTTTTTTTTCTAGATTACTATGTTTTTTGCTTTCACCCTTTCCATTTCCCCTCTTTTTGGTTGGCATTCCTTTTTGTATTATCCTTAATAAGAATAGAACTATCTATAACATGTGTACACAGAAGCCCCCTCATGATTACTCTCAGCAGTTATATGAGAAATACAAGGAAGCCTTTGAAGAGTACATCAATTCTACAGTAAGAACCATTGGCTTGAAATTTCTCTTAGCTTCTCACAGGGTTGAAGGTTTGTTGATGACATCAGTGGCACACTTGATTTTTATCAACTTGTAACCCACTAAGTGGTTAAATGTTCCCATGACAATTTTCACAAAATTCAGAATTTGTTAAACATATGTATAGTCTATGTTATTGAGATGGTTTATTTAGTGGTACTAACTTAATACTTCATTAACCAACTCAAACTCACATGTAGTGAGAGCATCCTCATTGCTCAAGTTTCCCATATGTGTTTGTATTTTTTTTAGGTTCTATCTTCTTTGAGAGAGAAGCACGACGAGTTCATGCTGAGGGAGCTCGTGAAAAGATGGGCAAATCATAAACTTATGGTCAGGTGGCTTTCACGGTTCTTCCATTATCTTGATCGGTATTTTATTGCTCGAAGGTCACTCCCTGCACTTAATGAAGTTGGTCTGACGTGCTTCCGTGATTTGGTTAGTCATTAGCATTTCTATGTTATATTATCTTGCATATCTGTTATCATTCAACCTATAGGAATAAATACTCTTTATGCTGTTGTTGTGTATGATATTTTACATTTTTGATTGTTGATAATAGGTTTATCAAGAGTTGAAAAGTAAAGCTAGAGATGCAGTTATAGCGCTGGCAAGTCTAATGCTTTCTTTATTTGACCCAATTTTGTATCATACTATGCGCCAAGAATAAGAATCGGTGATAATCCTTTTTTATCAGATTGATCAAGAACGTGAGGGTGAACAGATTGATAGAGCCTTATTAAAGAACGTGCTAGGTATATTTGTTGAAATTGGGATGGGGGAAATGGAGTTCTATGAAAATGACTTTGAAGATGCAATGCTTAAAGATACATCAGCTTATTATTCTCGAAAAGCATCAAACTGGATTGTGGAAGATTCTTGTCCAGATTATATGTTGAAGGTAAAGATCCTAATTCTTATCAGCAATTTTATTTAGTGCATAAGTTGGTCATATACTTATCCCAGAATGTAACTGATACCTGTTATTTCTAAAACAGGCAGAAGAGTGCTTGAAAAAAGAGAAGGATAGAGTTTCTCATTATTTGCACTCAAGCAGCGAGACAAAACTTCTGGAGGTCAGTATTGGAATGAGGCACTTGAAAATTGATATATTAGTATTTTCTCGGCATCTTAACTACTGATGAAAAGCTATTTAGAACTTCAAAATAAACTGTTTTGTATTTATGATATGGTGCAGTAACTATTTAACCCTTCTCTAAATGTTTAATTCTGTTGGATTCTTGGAGTTCCCATTAATTGGTGTCGGGTACTTGACTGCATTCTCCTTCGATGATTTCTTTGAATAAACTGAATACTTACGAGATGAAAGAAAATAGTCGTTCCAAACCTTTCAATTTAGTTTGTTCATTGTACTCGGAGGAGGAATAAAGTATTCATCTTGTGCATTTACAACTATGCTTCAGTGAGATGCTGTGCTTTCTTTTCGTCCATATTCTGATCATCTTTTTGAGCAGATTCTACTGAAAATTGCAAAAACTTTCCACTTTAAGTTAGAGGTGTTTCTCCATGATTATGCATCATTAATGAATCTCCTTCTTCATTATTCTTTTGCTTGAAACACATTTTCTTCATTGAGCCAAATGTACAAAGTGATGTTTTTATTTTTATTTGGAGAAACTAAAAACATTGACGCATATTACTTTGTCTCATGTTGGTTTTATCAGGTCATTACTTTCTAAGTTTTTACTTGATTAAGTCTGTTTAGTTTTGAAATGAGTTATGTTCAAAGTGCCTCTGGTTGCATTTATTTTTTCAATTGAGGCTACACTTGTGCTGCAGAAAGTGCAAAATGAATTATTGGTTGTATATACCAATCAATTGCTTGAGAAGGAGCATTCTGGATGCCGAGCTTTGCTTAGAGATGATAAGGTATTAATTCCTTGCATATTAGGTGTCTACTAGTCAATATGTATTTGACTTCTTATGTGAGTATCTTGTTTTCCCCCCTTCTTTTCATCCATCCCCTTTTCATGTCAGGTAGAGGATTTATCTCGAATGTACAGGCTATTCCACAGGATCCCTAAAGGTTTGGAACCAGTTGCAAATATGTTTAAGCAGGTATGGTCTTCTATTTAATTGTTGTGCAACTACAGGGTTTTTGTTGAGTTCTTTTTTTTGGTGGTTAAATACTTTGTTATGGTACATATTTTGCAGCATGTCACTGCTGAAGGCATGGTATTGGTGCAACAGGCCGAAGACTCAGCAAGTAACAAGGTCTGTTGACTGAACATGCCATGCTTCATTTGGCAATATGTTTTTTGGCCCCTTTTTCTTATTTTAATATCCATGCTTCTTGAACTAGTAGAGAAAAAGTTTAGGTGTATGGGTAGGAAAAAACAAGGGAAGTTTAAGGGGAGAATGCATAGAGCAACCTATCTTCGAGAACAATCAAGTAATCTAGAAAAAAAGGGAGTTCAAGACTTTGAATAGATTAAATAGCATTATCAGAAATACAAAGATATATGTGAAATTGCATCCACATGCTGTTCTTACGATCTGCGAGATTGTTTTTCCTTTTGGTAGTAGCTGATTTCAGTGCATTTTGAAGTACTGATATTTATGTAATTCTACAGGCTGAAAGTTCCAGTGGGTCACAGGAGCAGGTAAATCCACTTATCTGAATTTCTAGTCAAGTAGAATTTTTAAGTGTAATAGCTCAGGAGATGGCTCAATTGTGTTCGATCTGTTTCCTTAGGTCTTTGTTAGGAAGGTTATTGAGCTGCATGACAAATATATGGCATATGTGACCGACAGTTTTGCAAATAACTCTCTCTTTCACAAGGTATATCCAGGTGTTCACAGTTGTGTGGTTATTCATTTTTACCTTGAATAATTTGAGCTTTTATTTCTGATGTCTTAACTTCTGAACTTTTGTAGGCTTTGAAAGAGGCATTTGAGGTCTTCTGTAACAAAATTGTTGCTGGCTGTTCTAGTGCAGAACTCCTTGCCTCTTATTGTGATAATATCCTTAAGAAGGGCGGGAGTGAGAAACTCAGTGATGATGCTATTGAGGAGACATTAGATAAGGTAGCACTAACCCTATATCCAGCTTCACTTTCTGGTGGTCACTCGATTTTTCAGGATGACTTCATAATTGTTTATATTTCATATAGGTGGTGAAGCTTCTTGCGTATATCAGTGACAAGGACCTTTTTGCTGAGTTCTACAGGTCGGAAGCTACATCAAGTTTTTTTTTGATCCAGTAACTAGTTTCTTGTTACATCTCTAACCATTGAATATGTATCCGTCTTCATAATTTTATAGGAAGAAGCTTTCTCGGCGACTGCTTTTTGATAAAAGTGCCAATGATGACCATGAAAGGCTTATCTTAACAAAGTTAAAGCAGCAGTGTGGTGGACAGTTTACGTCAAAGATGGAGGGAATGGTGAGGAGAGTGTATAGTACTGCTAATTTTATCTTTCCCGTTCAAATTGTCTTGTCAACACTTACTGTTTGAAATAACAAAACAGGTGACGGACTTGACTCTGGCGAAGGAAAATCAGAGTCACTTTCAGGAATATCTCAGTAACAACTCGGCAGCTAATCCCGGAATTGATTTGACTGTCACAGTTCTTACAACTGGCTTTTGGCCTAGTTATAAATCTTCTGATCTGAGTCTCCCTGTGGAAATGGTGAGATCTGCTTCTCATCTGATATAATGATTCAATTTCTGCTGCTTGGTTTGATCTTTCCTTTTTGTATTTTTTTATGGGTGTTTACTCCTCTGTTGGTATCTCAGGTGAAGTGTGTAGAAGTCTTCAAGGAATTTTATCAGACGAAAACGAAACACAGGAAATTGACCTGGATTTATTCACTGGGTACATGCAATATCAATGGCAAGTTTGAATCAAAAACTATTGAACTTATTGTGGGAACTTACCAGGTGATCAGTTCGTGAAATGGTACTGCTGCAGCATCACTGTTTCTGACACCAAATATGGTTACTGATTAATGATTTCATTTTCAGGCTGCTGCTCTATTACTGTTTAATGCTTCAGATAGATTGAGTTACTCAGATATCAAAAGTCAGTTAAATTTGGCTGATGATGACTTGATCAGATTGCTTCAATCCCTGTCATGTGCTAAGTATAAAATTCTGACCAAAGAGCCTAGCAATAGAACTGTTTCGTCAACGGATCATTTTGAATTCAACTCCAAGTTCACTGACAGAATGAGGAGGATTAGGGTATAGATACTGTTTAGAGCTACTTGTATTTTGCTGTGATGCTTACTTTGTTGTATGCATTGTGGACTTCTTTTCTCAATGATCTTCTTGTATCGTTCAGATCCCTTTGCCTCCGGTTGATGAAAGGAAAAAAGTGGTTGAGGACGTTGACAAGGACAGACGTTATGCAATTGATGCTTGTATTGTGCGCATTATGAAGAGCCGGAAGGTGCTTCCTCATCAGCAGCTCGTGTTGGAGTGTGTTGAGCAATTGAGCCGCATGTTTAAGGTATCCACATTCACCATTTGGATTTCCTCCGTTTAGGTATTCCATCTAGGAAAGTGGACATAATTTTGGTCTGCATAATAACACGACATTCAATTTGACATGGAGGAATGTTGTTGCTTCTATACCAGACATGTCATTTTCTTTCTTGCTATCTAATTGCGTGTTACTTGAAACATCTTTTTATTTTTAAAAGTAAGTCATCAATGTCCTGGGGATCGCTTTGCTGATAGAATATCTTAGATCGTTATTGCTTGTTTTGCTTCTCCTAGTACTTGACTATTCAAAATAAAAATAAAATTGGAGAAGTGATGCTGACCGCTGACCACAGGGGTAACAGAAGGATATTGACTCCTTTGTGTCCAGCTGTCTTTTTTGTTGTATTTTGAACTTCTTCCTCTGTCTTGGTCAAAATTTTAGATGAAGAGATTTATTCAGTCCAAAATAAGTAACCATTCAAGCACTTGTCCTTTATCATAGGTATCGGGAGGAAGTACCTGAAATTTTTTCTCACCTTCTGTATATTTCCTATAGTTTGAGGAATGTGTGACCACCTCAAAACTAAGAGAGGTATCTATAGATATATAAAGTAGGATATGCAGAGTGCTGGAATTTTTGTTGAGGTGTCATCTTTGTAACCCAAACTTGCCAATATATTTCATCTTATTCCCTTGTCAAGTTTCTTCTCTGCCTTCAAATGATATTCAAAATAGTTATAGGCTCTAGTTGGAGAGATGTGTTAGCTTTGTCTATTCTAATTATTGAATTTTCTCTTGTATGTGTCGAAAAATAACAAAAGATTTCTGTGTAGCCTGATTTCAAAGCAATCAAAAAGAGGATTGAAGATCTTATCACTCGTGACTACTTGGAAAGAGACAAAGAGAACCCAAACTTGTTCAAGTACTTGGCCTGAGGCAACAAGCTGATACTGACTTGTCTTGGCACTGGATGGAAGTGAGTAGAGCTGGATTTGATTGTTAGCAGCGATTTTTTTTGACCTTTGCCTGAGTAGGCAACTTGTGCAGTTGTTAGTATATCACCACTTTTTTTCAGAAGGTGGCACTTGAATTTCCCTTTCAGTAAATATTTCAGCCGTGCACTTTTTTCCCTTGATATTCCTGATTGTCTCTTAAGCGCCACATCTTTGTGTAAATCTTATGCTTTGGTGTTTCTATATTGTCCTTGCAACCCCTGGATTACTAATGTGGGCAATAATATCTTAACCTGAAAATATATTACCATTT
TCTTTGGTAAAAAATAAATAAATAAAAAATAGTAAGAGTATATTTTGCAAGTTCTTCTCGTCTGCCCTAGCTCGCTCGCTCCTCTTCCGCGATCTCCTCGTGTTTTCTGCAACCAAACTGCTGTACGTTTGTTTATGTTTCTCTCTTTCGTGTTTTTTTTCATCTCCAGAGCCCTTTTATCCATTCCGTCTCTATCTCTAATTCCATCCAAACCCTAACCCTATCGAATTGTAAATTAATGCTTAATTTTTTTTTCTGTAATATATATATATATATCCCGCTTTCATCCCATCCTGTTTATGATTGATTGGTGGTAGGAGTGTATGCTGCTTCTTTTGGGTTTTGGGGCCTAAGAATTCATTGTGATTTTTCTTAAATCAATTGCTCGCATATTGTAGTTTCATGTGAATGTGATCAATAGGTTGTTTCTCCGAGTGTGATTTGATTTTACAAATTCAAGCTAATGTTGCTCATTTGCAGTTTGTGTTTATGACGACTAGCCAGATGAAGACAATCGAGCTGGAGGAAGGATGGAACTTCATGCAGAAGGGAATCACAAAATTAAAGAAAATCTTAGAAGGCCATCCAGATTCATTCAGCTCCGAAGAGTACATGATGCTCTACACGTATCCATAACATTCTTTTTTTTCTAGATTACTATGTTTTTTGCTTTCACCCTTTCCATTTCCCCTCTTTTTGGTTGGCATTCCTTTTTGTATTATCCTTAATAAGAATAGAACTATCTATAACATGTGTACACAGAAGCCCCCTCATGATTACTCTCAGCAGTTATATGAGAAATACAAGGAAGCCTTTGAAGAGTACATCAATTCTACAGTAAGAACCATTGGCTTGAAATTTCTCTTAGCTTCTCACAGGGTTGAAGGTTTGTTGATGACATCAGTGGCACACTTGATTTTTATCAACTTGTAACCCACTAAGTGGTTAAATGTTCCCATGACAATTTTCACAAAATTCAGAATTTGTTAAACATATGTATAGTCTATGTTATTGAGATGGTTTATTTAGTGGTACTAACTTAATACTTCATTAACCAACTCAAACTCACATGTAGTGAGAGCATCCTCATTGCTCAAGTTTCCCATATGTGTTTGTATTTTTTTTAGGTTCTATCTTCTTTGAGAGAGAAGCACGACGAGTTCATGCTGAGGGAGCTCGTGAAAAGATGGGCAAATCATAAACTTATGGTCAGGTGGCTTTCACGGTTCTTCCATTATCTTGATCGGTATTTTATTGCTCGAAGGTCACTCCCTGCACTTAATGAAGTTGGTCTGACGTGCTTCCGTGATTTGGTTAGTCATTAGCATTTCTATGTTATATTATCTTGCATATCTGTTATCATTCAACCTATAGGAATAAATACTCTTTATGCTGTTGTTGTGTATGATATTTTACATTTTTGATTGTTGATAATAGGTTTATCAAGAGTTGAAAAGTAAAGCTAGAGATGCAGTTATAGCGCTGGCAAGTCTAATGCTTTCTTTATTTGACCCAATTTTGTATCATACTATGCGCCAAGAATAAGAATCGGTGATAATCCTTTTTTATCAGATTGATCAAGAACGTGAGGGTGAACAGATTGATAGAGCCTTATTAAAGAACGTGCTAGGTATATTTGTTGAAATTGGGATGGGGGAAATGGAGTTCTATGAAAATGACTTTGAAGATGCAATGCTTAAAGATACATCAGCTTATTATTCTCGAAAAGCATCAAACTGGATTGTGGAAGATTCTTGTCCAGATTATATGTTGAAGGTAAAGATCCTAATTCTTATCAGCAATTTTATTTAGTGCATAAGTTGGTCATATACTTATCCCAGAATGTAACTGATACCTGTTATTTCTAAAACAGGCAGAAGAGTGCTTGAAAAAAGAGAAGGATAGAGTTTCTCATTATTTGCACTCAAGCAGCGAGACAAAACTTCTGGAGGTCAGTATTGGAATGAGGCACTTGAAAATTGATATATTAGTATTTTCTCGGCATCTTAACTACTGATGAAAAGCTATTTAGAACTTCAAAATAAACTGTTTTGTATTTATGATATGGTGCAGTAACTATTTAACCCTTCTCTAAATGTTTAATTCTGTTGGATTCTTGGAGTTCCCATTAATTGGTGTCGGGTACTTGACTGCATTCTCCTTCGATGATTTCTTTGAATAAACTGAATACTTACGAGATGAAAGAAAATAGTCGTTCCAAACCTTTCAATTTAGTTTGTTCATTGTACTCGGAGGAGGAATAAAGTATTCATCTTGTGCATTTACAACTATGCTTCAGTGAGATGCTGTGCTTTCTTTTCGTCCATATTCTGATCATCTTTTTGAGCAGATTCTACTGAAAATTGCAAAAACTTTCCACTTTAAGTTAGAGGTGTTTCTCCATGATTATGCATCATTAATGAATCTCCTTCTTCATTATTCTTTTGCTTGAAACACATTTTCTTCATTGAGCCAAATGTACAAAGTGATGTTTTTATTTTTATTTGGAGAAACTAAAAACATTGACGCATATTACTTTGTCTCATGTTGGTTTTATCAGGTCATTACTTTCTAAGTTTTTACTTGATTAAGTCTGTTTAGTTTTGAAATGAGTTATGTTCAAAGTGCCTCTGGTTGCATTTATTTTTTCAATTGAGGCTACACTTGTGCTGCAGAAAGTGCAAAATGAATTATTGGTTGTATATACCAATCAATTGCTTGAGAAGGAGCATTCTGGATGCCGAGCTTTGCTTAGAGATGATAAGGTATTAATTCCTTGCATATTAGGTGTCTACTAGTCAATATGTATTTGACTTCTTATGTGAGTATCTTGTTTTCCCCCCTTCTTTTCATCCATCCCCTTTTCATGTCAGGTAGAGGATTTATCTCGAATGTACAGGCTATTCCACAGGATCCCTAAAGGTTTGGAACCAGTTGCAAATATGTTTAAGCAGGTATGGTCTTCTATTTAATTGTTGTGCAACTACAGGGTTTTTGTTGAGTTCTTTTTTTTGGTGGTTAAATACTTTGTTATGGTACATATTTTGCAGCATGTCACTGCTGAAGGCATGGTATTGGTGCAACAGGCCGAAGACTCAGCAAGTAACAAGGTCTGTTGACTGAACATGCCATGCTTCATTTGGCAATATGTTTTTTGGCCCCTTTTTCTTATTTTAATATCCATGCTTCTTGAACTAGTAGAGAAAAAGTTTAGGTGTATGGGTAGGAAAAAACAAGGGAAGTTTAAGGGGAGAATGCATAGAGCAACCTATCTTCGAGAACAATCAAGTAATCTAGAAAAAAAGGGAGTTCAAGACTTTGAATAGATTAAATAGCATTATCAGAAATACAAAGATATATGTGAAATTGCATCCACATGCTGTTCTTACGATCTGCGAGATTGTTTTTCCTTTTGGTAGTAGCTGATTTCAGTGCATTTTGAAGTACTGATATTTATGTAATTCTACAGGCTGAAAGTTCCAGTGGGTCACAGGAGCAGGTAAATCCACTTATCTGAATTTCTAGTCAAGTAGAATTTTTAAGTGTAATAGCTCAGGAGATGGCTCAATTGTGTTCGATCTGTTTCCTTAGGTCTTTGTTAGGAAGGTTATTGAGCTGCATGACAAATATATGGCATATGTGACCGACAGTTTTGCAAATAACTCTCTCTTTCACAAGGTATATCCAGGTGTTCACAGTTGTGTGGTTATTCATTTTTACCTTGAATAATTTGAGCTTTTATTTCTGATGTCTTAACTTCTGAACTTTTGTAGGCTTTGAAAGAGGCATTTGAGGTCTTCTGTAACAAAATTGTTGCTGGCTGTTCTAGTGCAGAACTCCTTGCCTCTTATTGTGATAATATCCTTAAGAAGGGCGGGAGTGAGAAACTCAGTGATGATGCTATTGAGGAGACATTAGATAAGGTAGCACTAACCCTATATCCAGCTTCACTTTCTGGTGGTCACTCGATTTTTCAGGATGACTTCATAATTGTTTATATTTCATATAGGTGGTGAAGCTTCTTGCGTATATCAGTGACAAGGACCTTTTTGCTGAGTTCTACAGGTCGGAAGCTACATCAAGTTTTTTTTTGATCCAGTAACTAGTTTCTTGTTACATCTCTAACCATTGAATATGTATCCGTCTTCATAATTTTATAGGAAGAAGCTTTCTCGGCGACTGCTTTTTGATAAAAGTGCCAATGATGACCATGAAAGGCTTATCTTAACAAAGTTAAAGCAGCAGTGTGGTGGACAGTTTACGTCAAAGATGGAGGGAATGGTGAGGAGAGTGTATAGTACTGCTAATTTTATCTTTCCCGTTCAAATTGTCTTGTCAACACTTACTGTTTGAAATAACAAAACAGGTGACGGACTTGACTCTGGCGAAGGAAAATCAGAGTCACTTTCAGGAATATCTCAGTAACAACTCGGCAGCTAATCCCGGAATTGATTTGACTGTCACAGTTCTTACAACTGGCTTTTGGCCTAGTTATAAATCTTCTGATCTGAGTCTCCCTGTGGAAATGGTGAGATCTGCTTCTCATCTGATATAATGATTCAATTTCTGCTGCTTGGTTTGATCTTTCCTTTTTGTATTTTTTTATGGGTGTTTACTCCTCTGTTGGTATCTCAGGTGAAGTGTGTAGAAGTCTTCAAGGAATTTTATCAGACGAAAACGAAACACAGGAAATTGACCTGGATTTATTCACTGGGTACATGCAATATCAATGGCAAGTTTGAATCAAAAACTATTGAACTTATTGTGGGAACTTACCAGGTGATCAGTTCGTGAAATGGTACTGCTGCAGCATCACTGTTTCTGACACCAAATATGGTTACTGATTAATGATTTCATTTTCAGGCTGCTGCTCTATTACTGTTTAATGCTTCAGATAGATTGAGTTACTCAGATATCAAAAGTCAGTTAAATTTGGCTGATGATGACTTGATCAGATTGCTTCAATCCCTGTCATGTGCTAAGTATAAAATTCTGACCAAAGAGCCTAGCAATAGAACTGTTTCGTCAACGGATCATTTTGAATTCAACTCCAAGTTCACTGACAGAATGAGGAGGATTAGGGTATAGATACTGTTTAGAGCTACTTGTATTTTGCTGTGATGCTTACTTTGTTGTATGCATTGTGGACTTCTTTTCTCAATGATCTTCTTGTATCGTTCAGATCCCTTTGCCTCCGGTTGATGAAAGGAAAAAAGTGGTTGAGGACGTTGACAAGGACAGACGTTATGCAATTGATGCTTGTATTGTGCGCATTATGAAGAGCCGGAAGGTGCTTCCTCATCAGCAGCTCGTGTTGGAGTGTGTTGAGCAATTGAGCCGCATGTTTAAGGTATCCACATTCACCATTTGGATTTCCTCCGTTTAGGTATTCCATCTAGGAAAGTGGACATAATTTTGGTCTGCATAATAACACGACATTCAATTTGACATGGAGGAATGTTGTTGCTTCTATACCAGACATGTCATTTTCTTTCTTGCTATCTAATTGCGTGTTACTTGAAACATCTTTTTATTTTTAAAAGTAAGTCATCAATGTCCTGGGGATCGCTTTGCTGATAGAATATCTTAGATCGTTATTGCTTGTTTTGCTTCTCCTAGTACTTGACTATTCAAAATAAAAATAAAATTGGAGAAGTGATGCTGACCGCTGACCACAGGGGTAACAGAAGGATATTGACTCCTTTGTGTCCAGCTGTCTTTTTTGTTGTATTTTGAACTTCTTCCTCTGTCTTGGTCAAAATTTTAGATGAAGAGATTTATTCAGTCCAAAATAAGTAACCATTCAAGCACTTGTCCTTTATCATAGGTATCGGGAGGAAGTACCTGAAATTTTTTCTCACCTTCTGTATATTTCCTATAGTTTGAGGAATGTGTGACCACCTCAAAACTAAGAGAGGTATCTATAGATATATAAAGTAGGATATGCAGAGTGCTGGAATTTTTGTTGAGGTGTCATCTTTGTAACCCAAACTTGCCAATATATTTCATCTTATTCCCTTGTCAAGTTTCTTCTCTGCCTTCAAATGATATTCAAAATAGTTATAGGCTCTAGTTGGAGAGATGTGTTAGCTTTGTCTATTCTAATTATTGAATTTTCTCTTGTATGTGTCGAAAAATAACAAAAGATTTCTGTGTAGCCTGATTTCAAAGCAATCAAAAAGAGGATTGAAGATCTTATCACTCGTGACTACTTGGAAAGAGACAAAGAGAACCCAAACTTGTTCAAGTACTTGGCCTGAGGCAACAAGCTGATACTGACTTGTCTTGGCACTGGATGGAAGTGAGTAGAGCTGGATTTGATTGTTAGCAGCGATTTTTTTTGACCTTTGCCTGAGTAGGCAACTTGTGCAGTTGTTAGTATATCACCACTTTTTTTCAGAAGGTGGCACTTGAATTTCCCTTTCAGTAAATATTTCAGCCGTGCACTTTTTTCCCTTGATATTCCTGATTGTCTCTTAAGCGCCACATCTTTGTGTAAATCTTATGCTTTGGTGTTTCTATATTGTCCTTGCAACCCCTGGATTACTAATGTGGGCAATAATATCTTAACCTGAAAATATATTACCATTT
Download sequence region |
Get flanking sequences on SL2.50ch06
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc06g084520.2.1 Ubiquitin-protein ligase Cullin 4 (AHRD V1 **** D8RM97_SELML); contains Interpro domain(s) IPR001373 Cullin, N-terminal
TCTTTGGTAAAAAATAAATAAATAAAAAATAGTAAGAGTATATTTTGCAAGTTCTTCTCGTCTGCCCTAGCTCGCTCGCTCCTCTTCCGCGATCTCCTCGTGTTTTCTGCAACCAAACTGCTTTTGTGTTTATGACGACTAGCCAGATGAAGACAATCGAGCTGGAGGAAGGATGGAACTTCATGCAGAAGGGAATCACAAAATTAAAGAAAATCTTAGAAGGCCATCCAGATTCATTCAGCTCCGAAGAGTACATGATGCTCTACACAACTATCTATAACATGTGTACACAGAAGCCCCCTCATGATTACTCTCAGCAGTTATATGAGAAATACAAGGAAGCCTTTGAAGAGTACATCAATTCTACAGTTCTATCTTCTTTGAGAGAGAAGCACGACGAGTTCATGCTGAGGGAGCTCGTGAAAAGATGGGCAAATCATAAACTTATGGTCAGGTGGCTTTCACGGTTCTTCCATTATCTTGATCGGTATTTTATTGCTCGAAGGTCACTCCCTGCACTTAATGAAGTTGGTCTGACGTGCTTCCGTGATTTGGTTTATCAAGAGTTGAAAAGTAAAGCTAGAGATGCAGTTATAGCGCTGATTGATCAAGAACGTGAGGGTGAACAGATTGATAGAGCCTTATTAAAGAACGTGCTAGGTATATTTGTTGAAATTGGGATGGGGGAAATGGAGTTCTATGAAAATGACTTTGAAGATGCAATGCTTAAAGATACATCAGCTTATTATTCTCGAAAAGCATCAAACTGGATTGTGGAAGATTCTTGTCCAGATTATATGTTGAAGGCAGAAGAGTGCTTGAAAAAAGAGAAGGATAGAGTTTCTCATTATTTGCACTCAAGCAGCGAGACAAAACTTCTGGAGAAAGTGCAAAATGAATTATTGGTTGTATATACCAATCAATTGCTTGAGAAGGAGCATTCTGGATGCCGAGCTTTGCTTAGAGATGATAAGGTAGAGGATTTATCTCGAATGTACAGGCTATTCCACAGGATCCCTAAAGGTTTGGAACCAGTTGCAAATATGTTTAAGCAGCATGTCACTGCTGAAGGCATGGTATTGGTGCAACAGGCCGAAGACTCAGCAAGTAACAAGGCTGAAAGTTCCAGTGGGTCACAGGAGCAGGTCTTTGTTAGGAAGGTTATTGAGCTGCATGACAAATATATGGCATATGTGACCGACAGTTTTGCAAATAACTCTCTCTTTCACAAGGCTTTGAAAGAGGCATTTGAGGTCTTCTGTAACAAAATTGTTGCTGGCTGTTCTAGTGCAGAACTCCTTGCCTCTTATTGTGATAATATCCTTAAGAAGGGCGGGAGTGAGAAACTCAGTGATGATGCTATTGAGGAGACATTAGATAAGGTGGTGAAGCTTCTTGCGTATATCAGTGACAAGGACCTTTTTGCTGAGTTCTACAGGAAGAAGCTTTCTCGGCGACTGCTTTTTGATAAAAGTGCCAATGATGACCATGAAAGGCTTATCTTAACAAAGTTAAAGCAGCAGTGTGGTGGACAGTTTACGTCAAAGATGGAGGGAATGGTGACGGACTTGACTCTGGCGAAGGAAAATCAGAGTCACTTTCAGGAATATCTCAGTAACAACTCGGCAGCTAATCCCGGAATTGATTTGACTGTCACAGTTCTTACAACTGGCTTTTGGCCTAGTTATAAATCTTCTGATCTGAGTCTCCCTGTGGAAATGGTGAAGTGTGTAGAAGTCTTCAAGGAATTTTATCAGACGAAAACGAAACACAGGAAATTGACCTGGATTTATTCACTGGGTACATGCAATATCAATGGCAAGTTTGAATCAAAAACTATTGAACTTATTGTGGGAACTTACCAGGCTGCTGCTCTATTACTGTTTAATGCTTCAGATAGATTGAGTTACTCAGATATCAAAAGTCAGTTAAATTTGGCTGATGATGACTTGATCAGATTGCTTCAATCCCTGTCATGTGCTAAGTATAAAATTCTGACCAAAGAGCCTAGCAATAGAACTGTTTCGTCAACGGATCATTTTGAATTCAACTCCAAGTTCACTGACAGAATGAGGAGGATTAGGATCCCTTTGCCTCCGGTTGATGAAAGGAAAAAAGTGGTTGAGGACGTTGACAAGGACAGACGTTATGCAATTGATGCTTGTATTGTGCGCATTATGAAGAGCCGGAAGGTGCTTCCTCATCAGCAGCTCGTGTTGGAGTGTGTTGAGCAATTGAGCCGCATGTTTAAGCCTGATTTCAAAGCAATCAAAAAGAGGATTGAAGATCTTATCACTCGTGACTACTTGGAAAGAGACAAAGAGAACCCAAACTTGTTCAAGTACTTGGCCTGAGGCAACAAGCTGATACTGACTTGTCTTGGCACTGGATGGAAGTGAGTAGAGCTGGATTTGATTGTTAGCAGCGATTTTTTTTGACCTTTGCCTGAGTAGGCAACTTGTGCAGTTGTTAGTATATCACCACTTTTTTTCAGAAGGTGGCACTTGAATTTCCCTTTCAGTAAATATTTCAGCCGTGCACTTTTTTCCCTTGATATTCCTGATTGTCTCTTAAGCGCCACATCTTTGTGTAAATCTTATGCTTTGGTGTTTCTATATTGTCCTTGCAACCCCTGGATTACTAATGTGGGCAATAATATCTTAACCTGAAAATATATTACCATTT
TCTTTGGTAAAAAATAAATAAATAAAAAATAGTAAGAGTATATTTTGCAAGTTCTTCTCGTCTGCCCTAGCTCGCTCGCTCCTCTTCCGCGATCTCCTCGTGTTTTCTGCAACCAAACTGCTTTTGTGTTTATGACGACTAGCCAGATGAAGACAATCGAGCTGGAGGAAGGATGGAACTTCATGCAGAAGGGAATCACAAAATTAAAGAAAATCTTAGAAGGCCATCCAGATTCATTCAGCTCCGAAGAGTACATGATGCTCTACACAACTATCTATAACATGTGTACACAGAAGCCCCCTCATGATTACTCTCAGCAGTTATATGAGAAATACAAGGAAGCCTTTGAAGAGTACATCAATTCTACAGTTCTATCTTCTTTGAGAGAGAAGCACGACGAGTTCATGCTGAGGGAGCTCGTGAAAAGATGGGCAAATCATAAACTTATGGTCAGGTGGCTTTCACGGTTCTTCCATTATCTTGATCGGTATTTTATTGCTCGAAGGTCACTCCCTGCACTTAATGAAGTTGGTCTGACGTGCTTCCGTGATTTGGTTTATCAAGAGTTGAAAAGTAAAGCTAGAGATGCAGTTATAGCGCTGATTGATCAAGAACGTGAGGGTGAACAGATTGATAGAGCCTTATTAAAGAACGTGCTAGGTATATTTGTTGAAATTGGGATGGGGGAAATGGAGTTCTATGAAAATGACTTTGAAGATGCAATGCTTAAAGATACATCAGCTTATTATTCTCGAAAAGCATCAAACTGGATTGTGGAAGATTCTTGTCCAGATTATATGTTGAAGGCAGAAGAGTGCTTGAAAAAAGAGAAGGATAGAGTTTCTCATTATTTGCACTCAAGCAGCGAGACAAAACTTCTGGAGAAAGTGCAAAATGAATTATTGGTTGTATATACCAATCAATTGCTTGAGAAGGAGCATTCTGGATGCCGAGCTTTGCTTAGAGATGATAAGGTAGAGGATTTATCTCGAATGTACAGGCTATTCCACAGGATCCCTAAAGGTTTGGAACCAGTTGCAAATATGTTTAAGCAGCATGTCACTGCTGAAGGCATGGTATTGGTGCAACAGGCCGAAGACTCAGCAAGTAACAAGGCTGAAAGTTCCAGTGGGTCACAGGAGCAGGTCTTTGTTAGGAAGGTTATTGAGCTGCATGACAAATATATGGCATATGTGACCGACAGTTTTGCAAATAACTCTCTCTTTCACAAGGCTTTGAAAGAGGCATTTGAGGTCTTCTGTAACAAAATTGTTGCTGGCTGTTCTAGTGCAGAACTCCTTGCCTCTTATTGTGATAATATCCTTAAGAAGGGCGGGAGTGAGAAACTCAGTGATGATGCTATTGAGGAGACATTAGATAAGGTGGTGAAGCTTCTTGCGTATATCAGTGACAAGGACCTTTTTGCTGAGTTCTACAGGAAGAAGCTTTCTCGGCGACTGCTTTTTGATAAAAGTGCCAATGATGACCATGAAAGGCTTATCTTAACAAAGTTAAAGCAGCAGTGTGGTGGACAGTTTACGTCAAAGATGGAGGGAATGGTGACGGACTTGACTCTGGCGAAGGAAAATCAGAGTCACTTTCAGGAATATCTCAGTAACAACTCGGCAGCTAATCCCGGAATTGATTTGACTGTCACAGTTCTTACAACTGGCTTTTGGCCTAGTTATAAATCTTCTGATCTGAGTCTCCCTGTGGAAATGGTGAAGTGTGTAGAAGTCTTCAAGGAATTTTATCAGACGAAAACGAAACACAGGAAATTGACCTGGATTTATTCACTGGGTACATGCAATATCAATGGCAAGTTTGAATCAAAAACTATTGAACTTATTGTGGGAACTTACCAGGCTGCTGCTCTATTACTGTTTAATGCTTCAGATAGATTGAGTTACTCAGATATCAAAAGTCAGTTAAATTTGGCTGATGATGACTTGATCAGATTGCTTCAATCCCTGTCATGTGCTAAGTATAAAATTCTGACCAAAGAGCCTAGCAATAGAACTGTTTCGTCAACGGATCATTTTGAATTCAACTCCAAGTTCACTGACAGAATGAGGAGGATTAGGATCCCTTTGCCTCCGGTTGATGAAAGGAAAAAAGTGGTTGAGGACGTTGACAAGGACAGACGTTATGCAATTGATGCTTGTATTGTGCGCATTATGAAGAGCCGGAAGGTGCTTCCTCATCAGCAGCTCGTGTTGGAGTGTGTTGAGCAATTGAGCCGCATGTTTAAGCCTGATTTCAAAGCAATCAAAAAGAGGATTGAAGATCTTATCACTCGTGACTACTTGGAAAGAGACAAAGAGAACCCAAACTTGTTCAAGTACTTGGCCTGAGGCAACAAGCTGATACTGACTTGTCTTGGCACTGGATGGAAGTGAGTAGAGCTGGATTTGATTGTTAGCAGCGATTTTTTTTGACCTTTGCCTGAGTAGGCAACTTGTGCAGTTGTTAGTATATCACCACTTTTTTTCAGAAGGTGGCACTTGAATTTCCCTTTCAGTAAATATTTCAGCCGTGCACTTTTTTCCCTTGATATTCCTGATTGTCTCTTAAGCGCCACATCTTTGTGTAAATCTTATGCTTTGGTGTTTCTATATTGTCCTTGCAACCCCTGGATTACTAATGTGGGCAATAATATCTTAACCTGAAAATATATTACCATTT
![]() ![]() | translated polypeptide sequence |
>Solyc06g084520.2.1 Ubiquitin-protein ligase Cullin 4 (AHRD V1 **** D8RM97_SELML); contains Interpro domain(s) IPR001373 Cullin, N-terminal
MTTSQMKTIELEEGWNFMQKGITKLKKILEGHPDSFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYEKYKEAFEEYINSTVLSSLREKHDEFMLRELVKRWANHKLMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQELKSKARDAVIALIDQEREGEQIDRALLKNVLGIFVEIGMGEMEFYENDFEDAMLKDTSAYYSRKASNWIVEDSCPDYMLKAEECLKKEKDRVSHYLHSSSETKLLEKVQNELLVVYTNQLLEKEHSGCRALLRDDKVEDLSRMYRLFHRIPKGLEPVANMFKQHVTAEGMVLVQQAEDSASNKAESSSGSQEQVFVRKVIELHDKYMAYVTDSFANNSLFHKALKEAFEVFCNKIVAGCSSAELLASYCDNILKKGGSEKLSDDAIEETLDKVVKLLAYISDKDLFAEFYRKKLSRRLLFDKSANDDHERLILTKLKQQCGGQFTSKMEGMVTDLTLAKENQSHFQEYLSNNSAANPGIDLTVTVLTTGFWPSYKSSDLSLPVEMVKCVEVFKEFYQTKTKHRKLTWIYSLGTCNINGKFESKTIELIVGTYQAAALLLFNASDRLSYSDIKSQLNLADDDLIRLLQSLSCAKYKILTKEPSNRTVSSTDHFEFNSKFTDRMRRIRIPLPPVDERKKVVEDVDKDRRYAIDACIVRIMKSRKVLPHQQLVLECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKENPNLFKYLA*
MTTSQMKTIELEEGWNFMQKGITKLKKILEGHPDSFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYEKYKEAFEEYINSTVLSSLREKHDEFMLRELVKRWANHKLMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQELKSKARDAVIALIDQEREGEQIDRALLKNVLGIFVEIGMGEMEFYENDFEDAMLKDTSAYYSRKASNWIVEDSCPDYMLKAEECLKKEKDRVSHYLHSSSETKLLEKVQNELLVVYTNQLLEKEHSGCRALLRDDKVEDLSRMYRLFHRIPKGLEPVANMFKQHVTAEGMVLVQQAEDSASNKAESSSGSQEQVFVRKVIELHDKYMAYVTDSFANNSLFHKALKEAFEVFCNKIVAGCSSAELLASYCDNILKKGGSEKLSDDAIEETLDKVVKLLAYISDKDLFAEFYRKKLSRRLLFDKSANDDHERLILTKLKQQCGGQFTSKMEGMVTDLTLAKENQSHFQEYLSNNSAANPGIDLTVTVLTTGFWPSYKSSDLSLPVEMVKCVEVFKEFYQTKTKHRKLTWIYSLGTCNINGKFESKTIELIVGTYQAAALLLFNASDRLSYSDIKSQLNLADDDLIRLLQSLSCAKYKILTKEPSNRTVSSTDHFEFNSKFTDRMRRIRIPLPPVDERKKVVEDVDKDRRYAIDACIVRIMKSRKVLPHQQLVLECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKENPNLFKYLA*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
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![]() ![]() | [Associate new genbank sequence] |
HQ610200 Solanum lycopersicum cullin 1 mRNA, complete cds.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Fine mapping of ui6.1, a gametophytic factor controlling pollen-side unilateral incompatibility in interspecific solanum hybrids.
Genetics (2010)
Show / hide abstract
Show / hide abstract
Unilateral incompatibility (UI) is a prezygotic reproductive barrier in plants that prevents fertilization by foreign (interspecific) pollen through the inhibition of pollen tube growth. Incompatibility occurs in one direction only, most often when the female is a self-incompatible species and the male is self-compatible (the "SI x SC rule"). Pistils of the wild tomato relative Solanum lycopersicoides (SI) reject pollen of cultivated tomato (S. lycopersicum, SC), but accept pollen of S. pennellii (SC accession). Expression of pistil-side UI is weakened in S. lycopersicum x S. lycopersicoides hybrids, as pollen tube rejection occurs lower in the style. Two gametophytic factors are sufficient for pollen compatibility on allotriploid hybrids: ui1.1 on chromosome 1 (near the S locus), and ui6.1 on chromosome 6. We report herein a fine-scale map of the ui6.1 region. Recombination around ui6.1 was suppressed in lines containing a short S. pennellii introgression, but less so in lines containing a longer introgression. More recombinants were obtained from female than male meioses. A high-resolution genetic map of this region delineated the location of ui6.1 to approximately 0.128 MU, or 160 kb. Identification of the underlying gene should elucidate the mechanism of interspecific pollen rejection and its relationship to self-incompatibility.
Li, W. Royer, S. Chetelat, RT.
Genetics.
2010.
185(3).
1069-80.
A pollen factor linking inter- and intraspecific pollen rejection in tomato.
Science (New York, N.Y.) (2010)
Show / hide abstract
Show / hide abstract
Self-incompatibility (SI)-intraspecific pollen recognition systems that allow plants to avoid inbreeding-in the Solanaceae (the nightshade family) is controlled by a polymorphic S locus where "self" pollen is rejected on pistils with matching S alleles. In contrast, unilateral interspecific incompatibility (UI) prevents hybridization between related species, most commonly when the pollen donor is self-compatible (SC) and the recipient is SI. We observed that in Solanum, a pollen-expressed Cullin1 gene with high similarity to Petunia SI factors interacts genetically with a gene at or near the S locus to control UI. Cultivated tomato and related red- or orange-fruited species (all SC) exhibit the same loss-of-function mutation in this gene, whereas the green-fruited species (mostly SI) contain a functional allele; hence, similar biochemical mechanisms underlie the rejection of both "self" and interspecific pollen.
Li, W. Chetelat, RT.
Science (New York, N.Y.).
2010.
330(6012).
1827-30.
![]() ![]() | [Add ontology annotations] |
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- Genomic details
-
- AT4G02570.1 mRNA feature details
- AT4G02570.2 mRNA feature details
- AT4G02570.3 mRNA feature details
- AT4G02570.4 polypeptide feature details
- AT4G02570.1 polypeptide feature details
- AT4G02570.4 mRNA feature details
- AT4G02570.2 polypeptide feature details
- AT4G02570.3 polypeptide feature details
- Solyc06g084520.2 gene feature details
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