Clone hba-25a22

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Clone
Clone name
hba-25a22
LE_HBa0025A22
C02HBa0025A22
P025A22
Clone type
BAC
Contamination
none
Estimated length
96,893
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg312 : [coherent], 12 members:
C02HBa0025A22, C02HBa0043E10, C02HBa0143F24, LE_HBa0202H17, C02HBa0208B13, C02HBa0209K17, C02HBa0224K10, C02HBa0231M17, C02HBa0265K20, C02HBa0271B17, C02HBa0274C23, C02HBa0334C12
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
cLED-19-B18Tomato-EXPEN 2000plate 11A4
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLAST 
MarkerEvalueIdentity %ScoreParams
cLPT-2-K208e-350.987143.00evalue cutoff: 1e-10; min len = 25; min identity=0.96
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome 2
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 2 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 2
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Korea Research Institute of Bioscience and Biotechnology
Full Sequence
117,181 bp
C02HBa0025A22.2
AC215359.2 (GenBank) 		[View]
[Download fasta]
[Download full submission] (66.61 MB)
End Sequences
Warnings
none
FTP
Chromosome 2 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (24)
1425, 1476, 1551, 1717, 1824, 1893, 2019, 2141, 2247, 2628, 3039, 3209, 3274, 3385, 3550, 3843, 4698, 5695, 5791, 5951, 6730, 8491, 8541, 11775
HindIII in silico (28)
1023, 1273, 1416, 1424, 1467, 1554, 1718, 1820, 1994, 2013, 2135, 2253, 2640, 3035, 3211, 3273, 3414, 3592, 3894, 4600, 5367, 5496, 5675, 6697, 8507, 8535, 8584, 11556
Fragment Lengths Match Score
0.91
Annotations  
Browse
LE_HBa0025A22 has no browsable sequence annotations
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End Sequences

e.g. crystallin
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Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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