Clone hba-308c20
 Clone and library
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Clone and library
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| Physical mapping
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| Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg2585 : [coherent], 3 members:
LE_HBa0056A06, LE_HBa0140E05, LE_HBa0308C20
| Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
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Conflicted matches
None
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| Marker matches - BLAST |
| Marker matches - manual |
| Physical map (from marker matches) |
| FISH map |
| FISH images |
| SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
|---|---|---|---|---|
| 384-04 1 | Composite | Fluorescence | Phase | 44.0% |
| 384-06 1 | Composite | Fluorescence | Phase | 42.5% |
| 384-07 1 | Composite | Fluorescence | Phase | 38.5% |
| 384-08 1 | Composite | Fluorescence | Phase | 42.8% |
| 366-09 1 | Composite | Fluorescence | Phase | 40.9% |
| 384-11 1 | Composite | Fluorescence | Phase | 44.0% |
| 384-17 1 | Composite | Fluorescence | Phase | 44.1% |
| 366-29 1 | Composite | Fluorescence | Phase | 38.4% |
| 366-31 1 | Composite | Fluorescence | Phase | 41.3% |
| 366-34 1 | Composite | Fluorescence | Phase | 41.2% |
| 366-46 1 | Composite | Fluorescence | Phase | 46.0% |
| 366-47 1 | Composite | Fluorescence | Phase | 40.6% |
| 366-55 1 | Composite | Fluorescence | Phase | 38.6% |
| 366-58 1 | Composite | Fluorescence | Phase | 40.4% |
| 366-60 1 | Composite | Fluorescence | Phase | 40.3% |
| 366-65 1 | Composite | Fluorescence | Phase | 37.2% |
| 366-68 1 | Composite | Fluorescence | Phase | 43.6% |
| 366-71 1 | Composite | Fluorescence | Phase | 41.2% |
| 366-74 1 | Composite | Fluorescence | Phase | 44.8% |
| Mean±sd | 41.6%±2.4% | |||
Given an estimated length of 5.4µm for chromosome 9P and the mean percentage above, this BAC is approximately 2.2µm±0.1µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
| IL Mapping |
| Sequencing
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This clone is not assigned to any sequencing project.
Log in as a curator or sequencer to edit this clone's registry information.
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Sequencing Project
none
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HTGS phase
none
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Sequencing Status
none
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Sequencing Organization
not recorded
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Full Sequence
Sequence not available.
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End Sequences
None
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Warnings
none
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FTP | |
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Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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| Annotations
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Browse
LE_HBa0308C20 has no browsable sequence annotations
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Download
temporarily unavailable
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| User comments | [Add comment] |
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