Clone hba-9j11

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Clone
Clone name
hba-9j11
LE_HBa0009J11
C12HBa0009J11
P009J11
Clone type
BAC
Contamination
none
Estimated length
106,130
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg2601 : [coherent], 6 members:
C12HBa0009J11, LE_HBa0050N24, LE_HBa0185A15, LE_HBa0198C21, LE_HBa0282O12, LE_HBa0304B15
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL Mapping 
Assigned to project
Italy
IL-mapped to chromosome
-
IL-mapped to IL segment
-
IL mapping notes
-
Sequencing  
This clone is being sequenced by the Chromosome 12 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 12
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
not recorded
Full Sequence
117,580 bp
C12HBa0009J11.1
AC209660.1 (GenBank)
[View]
[Download fasta]
[Download full submission] (206.68 MB)
End Sequences
Warnings
none
FTP
Chromosome Assembly   
Restriction Fragments
HindIII in vitro (25)
1161, 1538, 1667, 2041, 2041, 2041, 2798, 2798, 2798, 2988, 3060, 3060, 3169, 3357, 4121, 4514, 4514, 4660, 4879, 5323, 5907, 6098, 8011, 11086, 12500
HindIII in silico (30)
1052, 1143, 1150, 1244, 1501, 1546, 1547, 1658, 1686, 2035, 2051, 2058, 2798, 2823, 2982, 3058, 3086, 3193, 3388, 4139, 4444, 4500, 4583, 4738, 5098, 5599, 5872, 7936, 10945, 12349
Fragment Lengths Match Score
0.90
Annotations  
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LE_HBa0009J11 has no browsable sequence annotations
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