Clone hba-31f12

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Clone
Clone name
hba-31f12
LE_HBa0031F12
C01HBa0031F12
P031F12
Clone type
BAC
Contamination
none
Estimated length
93,304
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg5300 : [coherent], 1 members:
C01HBa0031F12
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 1 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 1
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'manual'
Full Sequence
141,640 bp
C01HBa0031F12.1
AC239581.6 (GenBank)
[View]
[Download fasta]
[Download full submission] (0.09 MB)
End Sequences
Warnings
  • sequence length 141,640 is 51.8% different from estimated length 93,304
FTP
Chromosome Assembly   
Restriction Fragments
HindIII in vitro (24)
1127, 1373, 1500, 1788, 1984, 2069, 2262, 2855, 2855, 3154, 3257, 3395, 3461, 3975, 3975, 4452, 4452, 4768, 5196, 5196, 5735, 7617, 7952, 8906
HindIII in silico (43)
1061, 1097, 1108, 1113, 1121, 1259, 1348, 1353, 1355, 1385, 1489, 1499, 1500, 1559, 1681, 1777, 1957, 2040, 2056, 2254, 2268, 2767, 2845, 2861, 2870, 2918, 3148, 3269, 3401, 3486, 3941, 4064, 4393, 4441, 4610, 4883, 4956, 4956, 5383, 5428, 7370, 7786, 8854
Fragment Lengths Match Score
0.77
Annotations  
Browse
LE_HBa0031F12 has no browsable sequence annotations
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