Clone hba-96d22

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Clone
Clone name
hba-96d22
LE_HBa0096D22
C11HBa0096D22
P096D22
Clone type
BAC
Contamination
none
Estimated length
125,379
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 11 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 11
HTGS phase
3 - finished
Sequencing Status
in_progress
Sequencing Organization
Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences
Full Sequence
23,542 bp
C11HBa0096D22.2
AC212434.2 (GenBank)
[View]
[Download fasta]
[Download full submission] (96.07 MB)
End Sequences
Warnings
  • poor correspondence with in vitro restriction fragments
    (match score below 0.7)
  • sequence length 23,542 is 81.2% different from estimated length 125,379
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (20)
1983, 2183, 2531, 2531, 2617, 2769, 3039, 3039, 3488, 3945, 3945, 4095, 4368, 4861, 5502, 5502, 5878, 6862, 10854, 45387
HindIII in silico (6)
1466, 2703, 2850, 3034, 3039, 7147
Fragment Lengths Match Score
0.54
Annotations  
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LE_HBa0096D22 has no browsable sequence annotations
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