Clone hba-73p13

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Clone
Clone name
hba-73p13
LE_HBa0073P13
C02HBa0073P13
P073P13
Clone type
BAC
Contamination
none
Estimated length
22,512
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLAST 
MarkerEvalueIdentity %ScoreParams
U1532741973.00evalue cutoff: 1e-10; min len = 25; min identity=0.96
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL Mapping 
Assigned to project
Korea
IL-mapped to chromosome
-
IL-mapped to IL segment
2-K
IL mapping notes
-
Sequencing  
This clone is being sequenced by the Chromosome 2 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 2
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Korea Research Institute of Bioscience and Biotechnology
Full Sequence
131,009 bp
C02HBa0073P13.2
AC215377.2 (GenBank)
[View]
[Download fasta]
[Download full submission] (212.87 MB)
End Sequences
Warnings
  • poor correspondence with in vitro restriction fragments
    (match score below 0.7)
  • sequence length 131,009 is 482.0% different from estimated length 22,512
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (4)
2238, 3099, 5621, 11554
HindIII in silico (33)
1015, 1135, 1259, 1346, 1383, 1489, 1533, 1547, 1650, 1694, 1758, 1922, 1931, 1960, 2121, 2614, 2712, 2735, 2768, 3169, 3204, 3247, 4149, 4165, 4403, 4464, 4737, 4791, 6091, 6156, 8870, 13316, 15301
Fragment Lengths Match Score
0.45
Annotations  
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LE_HBa0073P13 has no browsable sequence annotations
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