Clone hba-57c7
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Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg4239 : [coherent], 3 members:
LE_HBa0018A19, C01HBa0057C07, C01HBa0159C14
Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
Conflicted matches
None
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Marker matches - BLAST |
Marker matches - manual |
Physical map (from marker matches) |
FISH map |
FISH images |
SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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658-01 1 | Composite | Fluorescence | Phase | 66.0% |
658-11 1 | Composite | Fluorescence | Phase | 63.3% |
658-13 1 | Composite | Fluorescence | Phase | 67.1% |
658-15 1 | Composite | Fluorescence | Phase | 66.5% |
658-17 1 | Composite | Fluorescence | Phase | 65.0% |
658-18 1 | Composite | Fluorescence | Phase | 67.1% |
658-19 1 | Composite | Fluorescence | Phase | 67.2% |
658-20 1 | Composite | Fluorescence | Phase | 66.9% |
658-21 1 | Composite | Fluorescence | Phase | 68.1% |
658-23 1 | Composite | Fluorescence | Phase | 67.8% |
658-24 1 | Composite | Fluorescence | Phase | 66.3% |
658-27 1 | Composite | Fluorescence | Phase | 67.3% |
658-40 1 | Composite | Fluorescence | Phase | 67.5% |
658-43 1 | Composite | Fluorescence | Phase | 64.7% |
658-49 1 | Composite | Fluorescence | Phase | 66.5% |
658-50 1 | Composite | Fluorescence | Phase | 64.0% |
658-54 1 | Composite | Fluorescence | Phase | 67.0% |
658-55 1 | Composite | Fluorescence | Phase | 65.4% |
658-57 1 | Composite | Fluorescence | Phase | 64.4% |
Mean±sd | 66.2%±1.4% |
Given an estimated length of 20.1µm for chromosome 1Q and the mean percentage above, this BAC is approximately 13.3µm±0.3µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL Mapping |
Assigned to project
USA
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IL-mapped to chromosome
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IL-mapped to IL segment
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IL mapping notes
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This clone is being sequenced by the Chromosome 1 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 1
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HTGS phase
3 - finished
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Sequencing Status
in_progress
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Sequencing Organization
Uploaded by account 'manual'
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Full Sequence
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End Sequences
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Warnings
none
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FTP | ||
Chromosome Assembly |
Restriction Fragments
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Browse
LE_HBa0057C07 has no browsable sequence annotations
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Download
temporarily unavailable
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