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Clone hba-115g22

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Clone
Clone name
hba-115g22
LE_HBa0115G22
C12HBa0115G22
P115G22
Clone type
BAC
Contamination
none
Estimated length
118,235
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 12 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 12
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
not recorded
Full Sequence
144,653 bp
C12HBa0115G22.1
AC209587.1 (GenBank)
[View]
[Download fasta]
[Download full submission] (253.41 MB)
End Sequences
Warnings
  • poor correspondence with in vitro restriction fragments
    (match score below 0.7)
FTP
Chromosome Assembly   
Restriction Fragments
HindIII in vitro (15)
1814, 2271, 3197, 3464, 4303, 5439, 5676, 7464, 8307, 8949, 10209, 10727, 11257, 17579, 17579
HindIII in silico (37)
1006, 1044, 1186, 1201, 1246, 1254, 1284, 1310, 1312, 1399, 1416, 1539, 1617, 1770, 1793, 2036, 2177, 2203, 2272, 2276, 2862, 3120, 3204, 3205, 3380, 3455, 3460, 4250, 5149, 5309, 7244, 8275, 8897, 9806, 10212, 10760, 15808
Fragment Lengths Match Score
0.64
Annotations  
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LE_HBa0115G22 has no browsable sequence annotations
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