Clone hba-203k13

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Clone
Clone name
hba-203k13
LE_HBa0203K13
C03HBa0203K13
P203K13
Clone type
BAC
Contamination
none
Estimated length
117,829
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg3480 : [coherent], 3 members:
C03HBa0199O09, C03HBa0203K13, C03HBa0287M06
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
T0781Tomato-EXPEN 2000plate 2F8
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLAST 
MarkerEvalueIdentity %ScoreParams
T07284e-950.971343.00evalue cutoff: 1e-10; min len = 25; min identity=0.96
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome 3
FISH mapNot on FISH map
FISH imagesNone
IL Mapping 
Assigned to project
China
IL-mapped to chromosome
3
IL-mapped to IL segment
-
IL mapping notes
-
Sequencing  
This clone is being sequenced by the Chromosome 3 Sequencing Project. (View projects)
Log in as a curator or sequencer to edit this clone's registry information.
Sequencing Project
Chromosome 3
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'jianfeng-ren'
Full Sequence
116,983 bp
C03HBa0203K13.1
AC238463.1 (GenBank) 		[View]
[Download fasta]
[Download full submission] (147.92 MB)
End Sequences
Warnings
none
FTP
Chromosome 3 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (33)
1106, 1191, 1304, 1473, 1473, 1884, 2078, 2301, 2301, 2361, 2517, 2690, 2719, 2748, 2748, 2950, 3246, 3402, 3736, 3818, 3981, 4199, 4199, 4333, 4333, 5043, 5043, 5484, 5886, 5886, 5971, 6529, 8896
HindIII in silico (31)
1093, 1097, 1175, 1292, 1471, 1850, 2057, 2300, 2306, 2311, 2367, 2518, 2681, 2725, 2797, 2956, 3235, 3409, 3751, 3846, 3993, 4205, 4313, 4830, 4836, 5148, 5528, 5594, 5675, 6445, 8838
Fragment Lengths Match Score
0.96
Annotations  
Browse
LE_HBa0203K13 has no browsable sequence annotations
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End Sequences

e.g. crystallin
Overgo match to marker what's this?
Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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