Clone hba-243a15
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Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg1985 : [coherent], 1 members:
LE_HBa0243A15
Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
Conflicted matches
None
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Marker matches - BLAST |
Marker | Evalue | Identity % | Score | Params |
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TG600 | 1 | 1025.00 | evalue cutoff: 1e-10; min len = 25; min identity=0.96 |
Marker matches - manual |
Physical map (from marker matches) |
FISH map |
FISH images |
SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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712-03 1 | Composite | Fluorescence | Phase | 73.8% |
712-07 1 | Composite | Fluorescence | Phase | 77.8% |
712-08 1 | Composite | Fluorescence | Phase | 77.4% |
712-11 1 | Composite | Fluorescence | Phase | 75.8% |
712-20 1 | Composite | Fluorescence | Phase | 77.1% |
712-29 1 | Composite | Fluorescence | Phase | 76.7% |
712-32 1 | Composite | Fluorescence | Phase | 75.7% |
712-38 1 | Composite | Fluorescence | Phase | 75.1% |
712-44 1 | Composite | Fluorescence | Phase | 75.9% |
712-45 1 | Composite | Fluorescence | Phase | 79.1% |
712-46 1 | Composite | Fluorescence | Phase | 79.1% |
712-50 1 | Composite | Fluorescence | Phase | 75.9% |
712-53 1 | Composite | Fluorescence | Phase | 76.4% |
712-55 1 | Composite | Fluorescence | Phase | 78.1% |
Mean±sd | 76.7%±1.5% |
Given an estimated length of 20.1µm for chromosome 1Q and the mean percentage above, this BAC is approximately 15.4µm±0.3µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL Mapping |
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This clone is not assigned to any sequencing project.
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Sequencing Project
none
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HTGS phase
none
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Sequencing Status
none
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Sequencing Organization
not recorded
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Full Sequence
Sequence not available.
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End Sequences
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Warnings
none
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FTP | |
Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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Browse
LE_HBa0243A15 has no browsable sequence annotations
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Download
temporarily unavailable
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