Clone hba-23d12

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Clone
Clone name
hba-23d12
LE_HBa0023D12
C06HBa0023D12
P023D12
Clone type
BAC
Contamination
none
Estimated length
102,452
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg1947 : [coherent], 9 members:
C06HBa0023D12, LE_HBa0114N18, LE_HBa0137J21, LE_HBa0138D11, LE_HBa0154B17, LE_HBa0168G23, LE_HBa0269O07, LE_HBa0298O17, LE_HBa0306L16
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 6 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 6
HTGS phase
1 - fragmented, unordered
Sequencing Status
complete
Sequencing Organization
not recorded
Full Sequence
97,838 bp
C06HBa0023D12.1
AC211025.1 (GenBank)
[View]
[Download fasta]
[Download full submission] (148.87 MB)
End Sequences
Warnings
  • sequence is not finished to HTGS3
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (24)
1245, 1483, 1507, 1619, 1619, 2172, 2263, 2512, 2512, 2788, 2800, 3628, 3628, 3950, 4197, 4796, 4936, 5909, 6319, 6960, 7505, 8292, 9247, 10565
HindIII in silico (27)
1088, 1174, 1205, 1222, 1356, 1464, 1612, 1628, 1804, 1909, 2188, 2264, 2287, 2522, 2541, 2769, 2823, 2861, 3233, 3678, 3986, 3990, 4618, 6905, 9214, 10471, 14254
Fragment Lengths Match Score
0.91
Annotations  
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LE_HBa0023D12 has no browsable sequence annotations
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