Clone hba-8l19
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Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg2841 : [coherent], 8 members:
C01HBa0008L19, LE_HBa0079G13, LE_HBa0160P17, LE_HBa0244N11, LE_HBa0248L05, LE_HBa0253N12, LE_HBa0273G13, LE_HBa0322G03
Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
Conflicted matches
None
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Marker matches - BLAST |
Marker matches - manual |
Physical map (from marker matches) |
FISH map |
FISH images |
SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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105-12 1 | Composite | Fluorescence | Phase | 91.0% |
105-13 1 | Composite | Fluorescence | Phase | 91.2% |
105-14 1 | Composite | Fluorescence | Phase | 91.7% |
105-19 1 | Composite | Fluorescence | Phase | 90.7% |
105-31 1 | Composite | Fluorescence | Phase | 90.5% |
105-34 1 | Composite | Fluorescence | Phase | 92.3% |
105-36 1 | Composite | Fluorescence | Phase | 92.3% |
105-37 1 | Composite | Fluorescence | Phase | 90.2% |
Mean±sd | 91.3%±0.8% |
Given an estimated length of 20.1µm for chromosome 1Q and the mean percentage above, this BAC is approximately 18.3µm±0.2µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL Mapping |
Assigned to project
USA
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IL-mapped to chromosome
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IL-mapped to IL segment
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IL mapping notes
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This clone is being sequenced by the Chromosome 1 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 1
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HTGS phase
3 - finished
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Sequencing Status
in_progress
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Sequencing Organization
not recorded
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Full Sequence
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End Sequences
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Warnings
none
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FTP | ||
Chromosome Assembly |
Restriction Fragments
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LE_HBa0008L19 has no browsable sequence annotations
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