Clone hba-22i12

Clone and library  
Clone
Clone name
hba-22i12
LE_HBa0022I12
C10HBa0022I12
P022I12
Clone type
BAC
Contamination
none
Estimated length
69,727
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 10 Sequencing Project. (View projects)
Log in as a curator or sequencer to edit this clone's registry information.
Sequencing Project
Chromosome 10
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'manual'
Full Sequence
117,869 bp
C10HBa0022I12.5
AC244293.6 (GenBank)
[View]
[Download fasta]
[Download full submission] (0.07 MB)
End Sequences
Warnings
  • poor correspondence with in vitro restriction fragments
    (match score below 0.7)
  • sequence length 117,869 is 69.0% different from estimated length 69,727
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (11)
1904, 1958, 3070, 3155, 3980, 5720, 8010, 8796, 10361, 10812, 11961
HindIII in silico (27)
1052, 1127, 1140, 1197, 1252, 1293, 1409, 1418, 1686, 1910, 1948, 2140, 2770, 2947, 3062, 3062, 3165, 3202, 4003, 5356, 7496, 7922, 8892, 10118, 10736, 11838, 12314
Fragment Lengths Match Score
0.64
Annotations  
Browse
LE_HBa0022I12 has no browsable sequence annotations
Download
temporarily unavailable
User commentsNone[Add comment] 
Search again  
Genomic Clone Search Select a genomic clone at random

full names, partial names, or lists of both

Related Links: