Clone hba-88l2
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Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg877 : [coherent], 3 members:
LE_HBa0068G02, C01HBa0088L02, LE_HBa0251C02
Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
Conflicted matches
None
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Marker matches - BLAST |
Marker matches - manual |
Physical map (from marker matches) |
FISH map |
FISH images |
SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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258-08 1 | Composite | Fluorescence | Phase | 99.3% |
258-10 1 | Composite | Fluorescence | Phase | 100.0% |
258-11 1 | Composite | Fluorescence | Phase | 98.5% |
258-12 1 | Composite | Fluorescence | Phase | 98.7% |
258-15 1 | Composite | Fluorescence | Phase | 100.0% |
258-17 1 | Composite | Fluorescence | Phase | 100.0% |
258-20 1 | Composite | Fluorescence | Phase | 99.3% |
258-21 1 | Composite | Fluorescence | Phase | 100.0% |
258-23 1 | Composite | Fluorescence | Phase | 98.8% |
258-29 1 | Composite | Fluorescence | Phase | 98.5% |
258-31 1 | Composite | Fluorescence | Phase | 100.0% |
258-47 1 | Composite | Fluorescence | Phase | 100.0% |
258-48 1 | Composite | Fluorescence | Phase | 100.0% |
258-49 1 | Composite | Fluorescence | Phase | 100.0% |
Mean±sd | 99.5%±0.6% |
Given an estimated length of 20.1µm for chromosome 1Q and the mean percentage above, this BAC is approximately 20.0µm±0.1µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL Mapping |
Assigned to project
USA
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IL-mapped to chromosome
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IL-mapped to IL segment
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IL mapping notes
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This clone is being sequenced by the Chromosome 1 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 1
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HTGS phase
3 - finished
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Sequencing Status
complete
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Sequencing Organization
not recorded
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Full Sequence
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End Sequences
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Warnings
none
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FTP | ||
Chromosome Assembly |
Restriction Fragments
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Browse
LE_HBa0088L02 has no browsable sequence annotations
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