Notice: After server upgrades, BLAST should be back now. Apologies for any inconvenience.

Clone hba-46m8

Clone and library  
Clone
Clone name
hba-46m8
LE_HBa0046M08
C02HBa0046M08
P046M08
Clone type
BAC
Contamination
none
Estimated length
104,675
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg2866 : [coherent], 1 members:
C02HBa0046M08
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 2 Sequencing Project. (View projects)
Log in as a curator or sequencer to edit this clone's registry information.
Sequencing Project
Chromosome 2
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Korea Research Institute of Bioscience and Biotechnology
Full Sequence
135,565 bp
C02HBa0046M08.3
AC215369.2 (GenBank)
[View]
[Download fasta]
[Download full submission] (191.17 MB)
End Sequences
Warnings
none
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (25)
1114, 1435, 1435, 1737, 1737, 1962, 2210, 2439, 2682, 2828, 2828, 2923, 3114, 3239, 3806, 3883, 4524, 4970, 5616, 5999, 6441, 6634, 8232, 9725, 13162
HindIII in silico (36)
1107, 1114, 1239, 1357, 1380, 1425, 1437, 1443, 1597, 1651, 1719, 1939, 1944, 2210, 2472, 2700, 2804, 2820, 2827, 2901, 2937, 3129, 3249, 3873, 3941, 4485, 5093, 5305, 5675, 5803, 6334, 6518, 6620, 8099, 9580, 13050
Fragment Lengths Match Score
0.84
Annotations  
Browse
LE_HBa0046M08 has no browsable sequence annotations
Download
 
User commentsNone[Add comment] 
Search again  
Genomic Clone Search Select a genomic clone at random

full names, partial names, or lists of both

Related Links: