Clone hba-190j3

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Clone
Clone name
hba-190j3
LE_HBa0190J03
C11HBa0190J03
P190J03
Clone type
BAC
Contamination
none
Estimated length
90,386
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg3466 : [coherent], 6 members:
LE_HBa0111L01, LE_HBa0149H19, C11HBa0190J03, LE_HBa0211G18, LE_HBa0240D09, LE_HBa0284P01
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
I2Tomato-EXPEN 2000plate 13F9
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome 11
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 11 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 11
HTGS phase
3 - finished
Sequencing Status
in_progress
Sequencing Organization
Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences
Full Sequence
122,911 bp
C11HBa0190J03.1
AC217003.1 (GenBank) 		[View]
[Download fasta]
[Download full submission] (106.59 MB)
End Sequences
Warnings
none
FTP
Chromosome 11 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (18)
1007, 1257, 1553, 1641, 1727, 1997, 2143, 2779, 2882, 3266, 3290, 3364, 4761, 5814, 6292, 8905, 12047, 25661
HindIII in silico (20)
1188, 1268, 1549, 1637, 1711, 1734, 1987, 2163, 2805, 2906, 3281, 3325, 3403, 4607, 5502, 6164, 8807, 11946, 25242, 25404
Fragment Lengths Match Score
0.93
Annotations  
Browse
LE_HBa0190J03 has no browsable sequence annotations
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End Sequences

e.g. crystallin
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Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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