Clone hba-169d11

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Clone
Clone name
hba-169d11
LE_HBa0169D11
C06HBa0169D11
P169D11
Clone type
BAC
Contamination
none
Estimated length
111,455
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg2143 : [coherent], 2 members:
C06HBa0169C11, C06HBa0169D11
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 6 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 6
HTGS phase
1 - fragmented, unordered
Sequencing Status
complete
Sequencing Organization
not recorded
Full Sequence
88,463 bp
C06HBa0169D11.2
AC211058.1 (GenBank)
[View]
End Sequences
Warnings
  • sequence is not finished to HTGS3
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (23)
1191, 1280, 1380, 1396, 1703, 2041, 2184, 2427, 2427, 2564, 3439, 3676, 3676, 4089, 4295, 5808, 5808, 7583, 8883, 9765, 11004, 11004, 13832
HindIII in silico (22)
1088, 1181, 1246, 1361, 1371, 1418, 1705, 1894, 1991, 2037, 2180, 2589, 2958, 3147, 3529, 3662, 3714, 4104, 4255, 5664, 13456, 20724
Fragment Lengths Match Score
0.92
Annotations  
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LE_HBa0169D11 has no browsable sequence annotations
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