Clone hba-6e18
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Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg1173 : [coherent], 10 members:
C04HBa0006E18, LE_HBa0164F08, LE_HBa0165L02, LE_HBa0171J15, LE_HBa0176B07, LE_HBa0190G18, LE_HBa0218E22, LE_HBa0256N02, LE_HBa0273D07, LE_HBa0336L13
Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
Conflicted matches
None
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Marker matches - BLAST |
Marker matches - manual |
Physical map (from marker matches) |
FISH map |
FISH images |
SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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175-03a 1 | Composite | Fluorescence | Phase | 22.2% |
175-03b 1 | Composite | Fluorescence | Phase | 26.2% |
175-03c 1 | Composite | Fluorescence | Phase | 23.4% |
175-04 1 | Composite | Fluorescence | Phase | 22.8% |
175-06 1 | Composite | Fluorescence | Phase | 26.6% |
175-08 1 | Composite | Fluorescence | Phase | 27.8% |
175-11 1 | Composite | Fluorescence | Phase | 26.0% |
175-17 1 | Composite | Fluorescence | Phase | 24.2% |
175-19 1 | Composite | Fluorescence | Phase | 25.5% |
175-20 1 | Composite | Fluorescence | Phase | 23.2% |
175-21 1 | Composite | Fluorescence | Phase | 22.6% |
175-25 1 | Composite | Fluorescence | Phase | 23.3% |
Mean±sd | 24.5%±1.8% |
Given an estimated length of 13.2µm for chromosome 4Q and the mean percentage above, this BAC is approximately 3.2µm±0.2µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL Mapping |
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This clone is being sequenced by the Chromosome 4 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 4
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HTGS phase
3 - finished
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Sequencing Status
complete
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Sequencing Organization
not recorded
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Full Sequence
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End Sequences
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Warnings
none
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FTP | ||
Chromosome Assembly |
Restriction Fragments
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Browse
LE_HBa0006E18 has no browsable sequence annotations
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