Clone hba-202n15

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Clone
Clone name
hba-202n15
LE_HBa0202N15
C08HBa0202N15
P202N15
Clone type
BAC
Contamination
none
Estimated length
158,212
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg4083 : [coherent], 4 members:
C08HBa0149C09, C08HBa0202N15, C08HBa0276E06, C08HBa0304F23
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 8 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 8
HTGS phase
2 - fragmented, ordered
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'japan'
Full Sequence
140,561 bp
C08HBa0202N15.1
AP009281.1 (GenBank)
[View]
[Download fasta]
[Download full submission] (312.60 MB)
End Sequences
None
Warnings
  • sequence is not finished to HTGS3
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (33)
1330, 1367, 1448, 1478, 1503, 1684, 1684, 1820, 1913, 2037, 2121, 2121, 2320, 2320, 2500, 2649, 2768, 2976, 2976, 3497, 3671, 4060, 4198, 4198, 5108, 5742, 6621, 6877, 7155, 7556, 9692, 10780, 40042
HindIII in silico (35)
1027, 1189, 1242, 1284, 1321, 1347, 1372, 1448, 1495, 1505, 1680, 1788, 1883, 2018, 2106, 2122, 2337, 2346, 2527, 2650, 2965, 2991, 3197, 3513, 3689, 4084, 4265, 4901, 5443, 6601, 6898, 7133, 9616, 10544, 17192
Fragment Lengths Match Score
0.94
Annotations  
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LE_HBa0202N15 has no browsable sequence annotations
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