Clone hba-272i8

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Clone
Clone name
hba-272i8
LE_HBa0272I08
C04HBa0272I08
P272I08
Clone type
BAC
Contamination
none
Estimated length
106,058
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 4 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 4
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Wellcome Trust Sanger Institute
Full Sequence
138,639 bp
C04HBa0272I08.1
CU468638.8 (GenBank)
[View]
[Download fasta]
[Download full submission] (0.09 MB)
End Sequences
None
Warnings
  • poor correspondence with in vitro restriction fragments
    (match score below 0.7)
FTP
Chromosome Assembly   
Restriction Fragments
HindIII in vitro (18)
2074, 2106, 2303, 2352, 2905, 3127, 3309, 3338, 3709, 3709, 4088, 5048, 5978, 8080, 9320, 11112, 16140, 17360
HindIII in silico (35)
1069, 1151, 1152, 1183, 1192, 1285, 1299, 1348, 1422, 1484, 1531, 1921, 2053, 2103, 2286, 2345, 2383, 2518, 2633, 2797, 2893, 3143, 3319, 3348, 3681, 3732, 3792, 4133, 4825, 5667, 8058, 9335, 10627, 15003, 16964
Fragment Lengths Match Score
0.68
Annotations  
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LE_HBa0272I08 has no browsable sequence annotations
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