Clone Read LE_HBa0049I14_SP6_10010

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0049I14_SP6_10010
Primer
SP6
ID from Seq. Facility
LE_HBa_049_I14-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
772 trimmed for vector and quality, 962 raw
Genbank Accession
Sequence
>LE_HBa0049I14_SP6_10010 (raw untrimmed)
AAAAAAAAAAGGGTTTNCTTTTCCAATGTACTGTGTGATGAGGGTGACATGATTTTTGCTTTTTGACTATGATTTAGTAATTTTAATGCATCGCTCTCGT
TTATCTATCCCATAAAGTTATCCTGGCTCCCTGCTTTTGTCATTGGAGGGGGTAGGGGTGAATGAGTAGAGCTCTAACATTATTGTTATCATCGTTGATA
GCGTGATCCTTATTTTAATAAAAAATACTTTTTCACTTGAGTATTTTGTGTCATATCAAGGACAGGGAAAACTTTACTTGCCAAGACCTTAGCTCGATTG
GTGAATGTTCCCTTTGTAATAGCAGATGCTACGACACTAACTCAGGTATGTTGTTATCCTGTCACCTTGGTAGAGATAGGAAACAACTCTCAGCTTAAAA
ATCTATAAATAGGATTAATATTTTTCTAAATCTTGTTCTCTTAAATGTAAATTATGTCAACACTGTCCTTAAAGTTCAAATTTCTTATTTCAATACATAA
TTTCCCCCCTTGTATATTTGTTACTCCTGCAAATATATTGTGTGTGTTAAATTGTTTGAAACTTTCTTGAGCCGGCAGTCTATCGGAAACAACCTAGTTA
CCGCACAAAGGTAGGGGTAAGGTCTGTGAATTCCCCACCCTCCCCAGACCACACTTGTAATATACTAGGTATGTTGTTTATTAATTATTTGCAAGATCCC
ATAAGCCTTGGGAACCGTTTGCAGATGGTCTGTTTGAGGCCAGAGTTAGTCCGTGTAAGGTGAGAAATCTGAATTAGCTCTTTTGGAGCTACAACTGAGC
TGATTTTGCTTTTGATTCAGTGAAAACGTATAATGGAGGAGACCCGTCTTCATCTATTGAAGGCGAGAGTGTTTTGAGGATTAGTGTTGGTATTGAAGAC
CGTGTAGTACATTGGTGCACGTGAGGAACTTTTGTGGGGACAAAATCATGTAATTGCTATAA
>LE_HBa0049I14_SP6_10010 (trimmed for quality and cloning vector)
ATGAGGGTGACATGATTTTTGCTTTTTGACTATGATTTAGTAATTTTAATGCATCGCTCTCGTTTATCTATCCCATAAAGTTATCCTGGCTCCCTGCTTT
TGTCATTGGAGGGGGTAGGGGTGAATGAGTAGAGCTCTAACATTATTGTTATCATCGTTGATAGCGTGATCCTTATTTTAATAAAAAATACTTTTTCACT
TGAGTATTTTGTGTCATATCAAGGACAGGGAAAACTTTACTTGCCAAGACCTTAGCTCGATTGGTGAATGTTCCCTTTGTAATAGCAGATGCTACGACAC
TAACTCAGGTATGTTGTTATCCTGTCACCTTGGTAGAGATAGGAAACAACTCTCAGCTTAAAAATCTATAAATAGGATTAATATTTTTCTAAATCTTGTT
CTCTTAAATGTAAATTATGTCAACACTGTCCTTAAAGTTCAAATTTCTTATTTCAATACATAATTTCCCCCCTTGTATATTTGTTACTCCTGCAAATATA
TTGTGTGTGTTAAATTGTTTGAAACTTTCTTGAGCCGGCAGTCTATCGGAAACAACCTAGTTACCGCACAAAGGTAGGGGTAAGGTCTGTGAATTCCCCA
CCCTCCCCAGACCACACTTGTAATATACTAGGTATGTTGTTTATTAATTATTTGCAAGATCCCATAAGCCTTGGGAACCGTTTGCAGATGGTCTGTTTGA
GGCCAGAGTTAGTCCGTGTAAGGTGAGAAATCTGAATTAGCTCTTTTGGAGCTACAACTGAGCTGATTTTGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.965706
Expected error %
0.0319309
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0049I14
Clone
Clone name
hba-49i14
LE_HBa0049I14
P049I14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found