Clone Read LE_HBa0144B21_SP6_100312

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0144B21_SP6_100312
Primer
SP6
ID from Seq. Facility
LE_HBa_144_B21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
708 trimmed for vector and quality, 803 raw
Genbank Accession
Sequence
>LE_HBa0144B21_SP6_100312 (raw untrimmed)
AAAATGGTTTTCTTTTCAGTATGTATAGATTGCATNANATATGACCTTTACATTGAATTTTTGTTTTCTGGATTAAAAACGTGTATATCTCTTGTAAAAT
ACATAATATGTATCAAAAGAGAAAGTATTTTATTAGAATGAATTGGATCATAATAAAGAGGAATTCATAAAGATGATTCATATAATCTACTCCAACTACT
GGAATTGCAGAGAAATATCCACAAATCTTTAAGCTAATCCAAGTATCATAACATGGGTGGGCATTAAGTACTAAGCACTAAGCAGGAACTGATGCATCCA
TACTAAACTTTCAAGTGGTAGACCAATTATAGTGTAGAATTTGTAACATGAAGGGAATAAATGAATGATGCCGGATAGGGTTATATGCTCGGGTGGAATT
TCAGGAGGGATCCTCGAATGATTATATGGACCATATGGAAAGAACAAACCAAATAGCATTCGAAGAGTTGAAATACTCCTTGTACAAGAAGAGGATTTTT
TTAAAAAAAAATTGGAACACCCTATGAAATAATGAATTATTGCTCTTCATAAAGAACTATGTTTTTTGTGAAATACTCTACTTATGTATATATATATATA
TATTGCATAACAGAATACTTCATTATCAAAAGAAATTACTCCCTCCATCCCAAATATGTGACACTCTTTCATTTTTAGTCAATCCAAAAAAGAATGACTT
ATATTCCATATTTAGTAACAATTTAACTTCAATCTTTCCATTTGACCCTTAATGACATGATTCATAGCCATAAAAAATTTCATGACTTATTCTAGAATAC
AAG
>LE_HBa0144B21_SP6_100312 (trimmed for quality and cloning vector)
GTAAAATACATAATATGTATCAAAAGAGAAAGTATTTTATTAGAATGAATTGGATCATAATAAAGAGGAATTCATAAAGATGATTCATATAATCTACTCC
AACTACTGGAATTGCAGAGAAATATCCACAAATCTTTAAGCTAATCCAAGTATCATAACATGGGTGGGCATTAAGTACTAAGCACTAAGCAGGAACTGAT
GCATCCATACTAAACTTTCAAGTGGTAGACCAATTATAGTGTAGAATTTGTAACATGAAGGGAATAAATGAATGATGCCGGATAGGGTTATATGCTCGGG
TGGAATTTCAGGAGGGATCCTCGAATGATTATATGGACCATATGGAAAGAACAAACCAAATAGCATTCGAAGAGTTGAAATACTCCTTGTACAAGAAGAG
GATTTTTTTAAAAAAAAATTGGAACACCCTATGAAATAATGAATTATTGCTCTTCATAAAGAACTATGTTTTTTGTGAAATACTCTACTTATGTATATAT
ATATATATATTGCATAACAGAATACTTCATTATCAAAAGAAATTACTCCCTCCATCCCAAATATGTGACACTCTTTCATTTTTAGTCAATCCAAAAAAGA
ATGACTTATATTCCATATTTAGTAACAATTTAACTTCAATCTTTCCATTTGACCCTTAATGACATGATTCATAGCCATAAAAAATTTCATGACTTATTCT
AGAATACA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.928434
Expected error %
0.238154
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0144B21
Clone
Clone name
hba-144b21
LE_HBa0144B21
P144B21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found