Clone Read LE_HBa0144M21_SP6_100840

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0144M21_SP6_100840
Primer
SP6
ID from Seq. Facility
LE_HBa_144_M21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
80 trimmed for vector and quality, 852 raw
Sequence
>LE_HBa0144M21_SP6_100840 (raw untrimmed)
TCTCCGCCGTTTCTTTTCCTTTCTTCTGTATTCGTCTCTCCTCACTTTATCTCCCCCACCCTCGTTATTCATCTTACTGCCCCCTTTTTCGAACTCCCAA
AATATATTAAGGAACGGGCAGCATCTGTTGAAGGAGTTCAACAAAGTTGTGGCCTGTCGGTGTTGCTCTG
TCTTTTCTTATCTTTCCGTTTGGAATGGAA
AATACATAAATCTGATCTCGAGAAAGTATCTGCAAGTCTTTTGTCATCTAAGATAATGAGCGAGGAAGCTCAACTAGTTGGTCATCTTTTTTATCCCTCG
GGACTACTGGACCACTTTTTCTACAGTTAGTTAGAAGGGTAATACTCATCCACTTTCGCTAGTTGGATTCATACTCTCCCTTCTCTCTTTTTTTCTGCTT
GGCTTCTCTTCCCCCTCTTCCGTAGTGTCCCTTTCCTCTTTCCCCCTCTTTTTCTTTCTCTCGCCTATGTTTCTATTCCTTCTTATTTTTTTTTCTCCCT
TCTCTTCCTTTCTTTTCTTCTTCTTCCCTTATTCCTTTGTCCTCTTCTCCTCTCCTGCCTCGTCCCTTTTTCTCTCCAGCTTTTCCATCTCTTATCTTTT
TTAGTCATCTTTTCCTTTTTTATTTTTCTTAATTCCATTTTCTCCCCTCGTCTGCTCTTTTCTCTCTTCTCTTCTTGCCTTCTCTCTCTATCTTCTTTCC
CTCCCTCGCTTTGTCTCTCTTTCCCCTTTTCTTCCTTTTCTTCTTCGTCTCTCCCTCCTTTTCCCTTGCCTCCTCCTTCGCTCTTTCTTCTTTCTCCTTT
CTTCTTCTTACTTCTTCTCAATTTTTATTTTCTTTCATCTTTCTTTCATTTT
>LE_HBa0144M21_SP6_100840 (trimmed for quality and cloning vector)
TCTTTTCTTATCTTTCCGTTTGGAATGGAAAATACATAAATCTGATCTCGAGAAAGTATCTGCAAGTCTTTTGTCATCTA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.86151
Expected error %
1.32984
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0144M21
Clone
Clone name
hba-144m21
LE_HBa0144M21
P144M21
Clone type
BAC
Contamination
none
Estimated length
103,990
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found