Clone Read LE_HBa0148A07_T7_101005

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0148A07_T7_101005
Primer
T7
ID from Seq. Facility
LE_HBa_148_A07-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
485 trimmed for vector and quality, 692 raw
Genbank Accession
DU091715
Sequence
>LE_HBa0148A07_T7_101005 (raw untrimmed)
CTGGGTACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATATTGTTCCCTCTTTTAGAATCCTTTTGGTTTAATCTTGAACATACACAT
AATCTGAAATGAGAATAGTGCAGGATGATCGTGTTGCTGCTGTGTGGCTCAACAATGCATATGTTCATAAAGCTATTCATGCAGAACAGACAACTGTGAT
AGGTCCCTGGGAGCTATGCACAGACAAAATAACTATGTATCATGATTCTGGAAGCATGATTCCTTATCACAAAAATCTCACAGCTCGGGGCTATCGGGCA
ATCATATACAGGTTCAATAGATTACTAAGTCTCTTGACTTCTCTCTATGCATTTTTTTGTGATAATTTCGCTATCACAGTAATTATAACATGCTCTTCCA
CTATTCTCATGTTGCTGTAGGCTGCCTAAGGAAAATGTTGTTAGTGAACATGTACCTGATCACACACTAATTATCCGAGAACTTTTTTGATGCTATAACC
ATATAAATTATGTTCATTTTTTGGTTTGTTCCTTTGGGGATCACGAAATGAGTGAACCATACACTGGTTCAGCACTATGGACTATATTTTCTTGGATTTT
CAATCTTGGATGAATGGAAGCCTTTGTATTGTATGAATAATTTTTATATTATGTTTGCTTTCTTTAAATTTTTTTTGTATAGTTTGGCTCTG
>LE_HBa0148A07_T7_101005 (trimmed for quality and cloning vector)
AGCTTATATTGTTCCCTCTTTTAGAATCCTTTTGGTTTAATCTTGAACATACACATAATCTGAAATGAGAATAGTGCAGGATGATCGTGTTGCTGCTGTG
TGGCTCAACAATGCATATGTTCATAAAGCTATTCATGCAGAACAGACAACTGTGATAGGTCCCTGGGAGCTATGCACAGACAAAATAACTATGTATCATG
ATTCTGGAAGCATGATTCCTTATCACAAAAATCTCACAGCTCGGGGCTATCGGGCAATCATATACAGGTTCAATAGATTACTAAGTCTCTTGACTTCTCT
CTATGCATTTTTTTGTGATAATTTCGCTATCACAGTAATTATAACATGCTCTTCCACTATTCTCATGTTGCTGTAGGCTGCCTAAGGAAAATGTTGTTAG
TGAACATGTACCTGATCACACACTAATTATCCGAGAACTTTTTTGATGCTATAACCATATAAATTATGTTCATTTTTTGGTTTGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.940266
Expected error %
1.29218
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At4g12910.1 Score 87 E Value 3e-18 Identity 19.40% Align. Length 185bp (38.14%) Frame 3
68417.m02019 serine carboxypeptidase S10 family protein SERINE CARBOXYPEPTIDASE I PRECURSOR - Hordeum vulgare, SWall:CBP1_HORVU
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At3g25420.1 Score 72 E Value 2e-13 Identity 17.70% Align. Length 185bp (38.14%) Frame 3
68416.m03161 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) from [Oryza sativa]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF44708.1| Score 112 E Value 3e-24 Identity 28.00% Align. Length 185bp (38.14%) Frame 3
wound-inducible carboxypeptidase [Lycopersicon esculentum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAA32940.1| Score 90 E Value 3e-17 Identity 21.30% Align. Length 182bp (37.53%) Frame 3
carboxypeptidase I precursor
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0148A07
Clone
Clone name
hba-148a7
LE_HBa0148A07
P148A07
Clone type
BAC
Contamination
none
Estimated length
121,134
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found