Clone Read LE_HBa0156B03_T7_101813

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156B03_T7_101813
Primer
T7
ID from Seq. Facility
LE_HBa_156_B03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
16 trimmed for vector and quality, 802 raw
Sequence
>LE_HBa0156B03_T7_101813 (raw untrimmed)
TGACGGACAAAGACGATGTTGACACCTGGGTGAACGAACCTNGTGACCAAATTAAGATAGCTGCCAAAAAAAAAAGTTTCTTATTTGGCCTTTAAGGGCT
AGAAGAAATGCTTATTCATCCTTTTA
CTCACATAAAGGGGCCCAAGCTAATCTGGGTTCCCAAGACTAATCTTTGACTATTGTTTCAGGTGAAGGTGAGA
GGGAAAAGGCCAACTTTTTTCATGAATAGTGGAGGCTCCAGAATGGTGCTAAAAATGGTAGAAAATTCCTCTCACTCTGTGATTTTCAAAGAGGCAGTTT
ATTCCTTGAAAAGGATGAGAAAAATAGAAAAAAAAGGGTTGATAAAATTGACATGATATCGAAGCTCGATGATGATGCAGATTCAAAGAACACCGCTAAT
AAACCTGCTCCACCCCTTACACTCATTGATGCGACTGCAAAAGAGAATGACCACCTATCTATGGAACGAGGAATTGGCGGAATACTGCAGCAACAACACA
GCACAACATGACACACCTCGGGGAACTTTATACGTCAACTTGTCCAAGTGTTCTAGACTAGTACACAATTGACAGAATGTTGCTTCGAGAATACTCGTAA
CTATTCCACTACATAAATAGTGTTGTGCACCGAGCTATGCCAGCTATGAAACTGATAAATAATGATAGTTGCATATCATAATGATAAAATAAATGCGACC
ATAGCCAGCTACAGTATTATCTGCGCTGCTACCGCACAGAAAAATCACCATTCTTTAACACGCATCCTGTAATTTTGACTGTGTCTTTTATCTAGCGTCC
TT
>LE_HBa0156B03_T7_101813 (trimmed for quality and cloning vector)
CTCACATAAAGGGGCC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.733936
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156B03
Clone
Clone name
hba-156b3
LE_HBa0156B03
P156B03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found