Clone Read LE_HBa0156J17_SP6_102224

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156J17_SP6_102224
Primer
SP6
ID from Seq. Facility
LE_HBa_156_J17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1279 raw
Sequence
>LE_HBa0156J17_SP6_102224 (raw untrimmed)
ACGCAGTCTCGCGTGTATGATAGTTCTAGTACTTATATACTGCTATGGATGAGTTGGGTAGTATTTTTGTCTTTCTAGNGTGGTGACGAGCGAGCACGTC
GATGAGAACGAGAGCGTTGAGAACAGTCGCAATAGCATCGTCGTCTAGACATATGATGTTACATCATCTGTAGGTGTAGTCTTGATGACACGAACTGACG
TCGCGTCAGATAAAATGCTGCGTGCGTAGAGTGATTAATGTGTGTNATAGCGCGTAGATGTGTGGACGAGGAGAGAGGCTACGACGCGCGCGTGACAGTG
CAGCCGAGCGTGTGCGGTGACAGCGTCTGACATNCGCGCACGTTTCTACTCACTATGTGCGCGCCCCCGCGCGGGTTGTGACATTTGATGATACGACGAG
ANCTCTCTATGTGCGCCGCGTGCACTTTCTATACAGANATTAGGTCTGTCTGTGCAGCTATTATAGATGCGACGCCTAGCAACAGGCGCACAGCGCATCA
ACGAGGTAGACTCGCGCCACACGCTGACGCCTGTGCTGACTCAGTTACTGCAATCGTANCACTANGATGATCAGCGAGATGATGTAGATGTGGCGCTCGA
CGCATGCTGNGCGATGCGAGAAATGCAGAGAGAGGAAGTGTATGTGTGATAATACTAGTTGTGAGCTGATAAGACTTCACGCTCCCATTTCTCACGAGCT
GCATCGGCTCGGGCTGACGCGCGGCGCTGGTCCGTCTGCGATGCTCTGCTGACTTTAGTTGAGTCTGGTGNTCGTGCGATGCATCTCGTCGCGCTACTCG
TCTCGCTGGAATGACCTATTTGATCTTTTGCAATCGGTACNGAGTCTTANATGATGATGTGCCGAATCTGNTGTCGTTATNTGAATGTGCTGCGCCTGGT
CATATGCTGTTCTCATGTACTCGTCCTGCACGCTCTCGCTCTACGTCATTGTTACTACTGACGTCATCGACCAGTCATGCGCGTGCTAGTCGTCTACGGA
TCGCACACGANCAGTGTANAGAGACTGGGTTACAGACCGCATAGCGGAGCGGAGGCGTCTCGTCATCACGTGTGCCTCTGATCGTGTATCGTGTTGCAGT
NCANATTGCTGTTGTGATCGTGAGCGTGTGGCTGCGTTCTGACAATTCTATGCGACAGATTATCTCAAGAACGTTGNGCAGNGTCGTGTCTGTATGCGCT
ATACGTGTGCAGGGCGTTCGTATCACTGNTTGAGTGCGCACTANATNGTCAGTTGATCGTATNAGATGTNTATCTTGTC
>LE_HBa0156J17_SP6_102224 (trimmed for quality and cloning vector)
AG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.65311
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156J17
Clone
Clone name
hba-156j17
LE_HBa0156J17
C02HBa0156J17
P156J17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found