Clone Read LE_HBa0156J17_T7_102225

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156J17_T7_102225
Primer
T7
ID from Seq. Facility
LE_HBa_156_J17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1367 raw
Sequence
>LE_HBa0156J17_T7_102225 (raw untrimmed)
CCCAGACTCTACTGAATAGTTGACACATAGTGTTCTTGTGCTNCNTCTCAGTTNTGCGAGAGAGAGTNGAGANATCNCTCATCTCTNAATNCAGAGATAG
ACAGAGTATCACTAGATGNACNAGATTATAGCACNCTTCTCTGCATNTATATCATCTGTANTCTATCATATTATATCTCACAGCGCTTGTAGAGAGACAT
TGGCGAACNGAGTTACTGCAAGGATGAGTNCAGAAACAGAAGACAGATCCACCACATANAGAGCAGCGCGCGCGAGTGCGAGGAGAGCGNGGGATAGAGC
GAGGNCGGAGAGGCAGCATATGACGACGTAGNTACGTNCGAATACCGACTGCTNCTCANGCCATAGCAGCTATAGACATGCCACATGATANCNCTCACAG
ACATCGANGTGAGCACATACANGACTACTTATGGTGATGCTGCGTGTGATACTGCGCGTGTANGCGNCGAGCANCCGCACTGCGGGATGAATCACAATGT
CACGTGCTCCTGATTGTGATACTATTTACTATCGCAGTGACTCTCACGACAGGACTTGCCTTATATNACCCGAGCAGCTGCATGTGCGACTCTACATATA
GAACACTATGAACGACACTGAGAGACAGCTNATGNACTGAGCATGCACTGACAAGTGACTTGANCTCGACATAGTNTAANGANACTCAACACTCGCCTCG
ACACTCGNGCGACACGACGAGCACTCAGCCGTCCGNAGTCACCGCTGCACGACTCTCCACACAGCGCGCGCCNACGCACGATCGCATCTGCTCTCGCTCA
CTCGCACATCAAGCGCGTGCTCGCAGAGCTACACTACTAACTGTGCTGAACACTGATCTGCAATACGTGNGAGTCACTATATGTATGGCTCTACTGGAGA
GATGNATGTCCTGCACTCACACACTTNATGNCATGTCATCAGCACNACACGTCGCTATCATCACCCAANNGACCTATCTGCACATATGTGCTCATTGCGT
ACAGTGATATAAGCAACGTCACGATACGCTCGCTCACGTGCCTACTCAGCTTCACGCACCGCGATATCTATGACCACACACGAGACCCGACGACNACCGC
ATANCTCGAGGAGATGCTACCACATGCTACAGATAGCTCTACTCACANACTCCTCGTACACTGAATACGAGCCACNCTATNATCGCGCGACGTCCATGCC
TTGNTNCNCTCACATTCTGGCTTCTCCGTCTTCGCTCTGCTTATCTCCACCGCATAACCGATATCAACTACCTCGTTAGCTATTAATACAATCTNACTCT
CTCGTCACTGCCTCACTAATCACAAGATATGCGAAAGCGATGACACGGATANGCCACACCAAGACAA
>LE_HBa0156J17_T7_102225 (trimmed for quality and cloning vector)
TC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
25.4565
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156J17
Clone
Clone name
hba-156j17
LE_HBa0156J17
C02HBa0156J17
P156J17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found