Clone Read LE_HBa0156P05_SP6_102488

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156P05_SP6_102488
Primer
SP6
ID from Seq. Facility
LE_HBa_156_P05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
530 trimmed for vector and quality, 969 raw
Sequence
>LE_HBa0156P05_SP6_102488 (raw untrimmed)
GGGGGCGCCCAGGCTTCATCAGTAGCATTCGAGACCTTGTTAAAACCTTGAGTTTATTTTCAACGCNGGGAGTGTTTACACGGTATTCTAGTAAAGCTTC
ATGGTTAAACATTCGGAAACTTGTAACACCTTGAGTTTATTTTCAAGGGGGGAGCGTTACACGGTATTCTAGTAAAGCTTCAAGTTGGTTAAGCATTCGG
GACCTTGTAACACCTTGAAGTTATCTTCAAGGCGGGAGCGTTACACAGTATTCTAGTAAAGCTTCAAGTTGGTTAAGCATTCGGGACCTTGTAAAACCTT
GTGGTTATTTTCAAGGCGGGAGCATTACATGGTATTCTAATAAAGTTTCATAGTTAAACATTCAGAACCTTGTAACACCTTGAGTTTATTTTCAAGGGGG
AAGCGTTACACAGTATTCTAGTAAAAGCTTCAAGTTGTTAAGCATTCGGGACCTTGTAAAACCTTGAGGTTATTTTCAAGGCGGGAGCATTACACGGTCT
AGAGCTAACTTCAAAAATCATCTTGAAAGATTCTGAAGGTATTAAATTTTGAATTTTTGATATGTTAGAGATCAAAAAGTCTAATTTCTGAAAAAATCCA
ACGGTTCATGATTATTACTTTACCCCCAATGCGATATAATTTTCTACGACGAGACCTGTCAGGCTGCAAAAAATAACGAATTTATAACTTGACATAATCG
AAAGCTTTCTTCATAAAATTCATCTATAAAAATTCTGTAGGGATTGAATTTTTCATTTTCGGTCTTGTATCTATGTTATACATTTTGTCTCGACACATAC
CACCGCCTCAGGGTACCTTGACATGAGGTAGCTAATCAGCTAACTCCCCAACCCACCGTTACTTGTGCACAACTTTATATTAACATTATCATTATAAAGT
TCACCCCGTCACTGTCTCTCCTCCAACCCACGAGCAAACGCGCAACTGTACGATTCCTTTCTTTGAAAT
>LE_HBa0156P05_SP6_102488 (trimmed for quality and cloning vector)
CTTGTTAAAACCTTGAGTTTATTTTCAACGCNGGGAGTGTTTACACGGTATTCTAGTAAAGCTTCATGGTTAAACATTCGGAAACTTGTAACACCTTGAG
TTTATTTTCAAGGGGGGAGCGTTACACGGTATTCTAGTAAAGCTTCAAGTTGGTTAAGCATTCGGGACCTTGTAACACCTTGAAGTTATCTTCAAGGCGG
GAGCGTTACACAGTATTCTAGTAAAGCTTCAAGTTGGTTAAGCATTCGGGACCTTGTAAAACCTTGTGGTTATTTTCAAGGCGGGAGCATTACATGGTAT
TCTAATAAAGTTTCATAGTTAAACATTCAGAACCTTGTAACACCTTGAGTTTATTTTCAAGGGGGAAGCGTTACACAGTATTCTAGTAAAAGCTTCAAGT
TGTTAAGCATTCGGGACCTTGTAAAACCTTGAGGTTATTTTCAAGGCGGGAGCATTACACGGTCTAGAGCTAACTTCAAAAATCATCTTGAAAGATTCTG
AAGGTATTAAATTTTGAATTTTTGATATGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.9686
Expected error %
0.591441
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156P05
Clone
Clone name
hba-156p5
LE_HBa0156P05
P156P05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found