Clone Read LE_HBa0158G10_T7_102835

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0158G10_T7_102835
Primer
T7
ID from Seq. Facility
LE_HBa_158_G10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1241 raw
Sequence
>LE_HBa0158G10_T7_102835 (raw untrimmed)
TATATTTTAGGNTCTCCTCGCGGGGAGTTGTTTCTCAAAAAATATAAACCTCCTTCGTGATGGCACAAGGTTATGCTTAGTGAGGTTCAGAACATGTGCC
ATCCACCCCTTTCTCTCTCCCCCTTCCTGAGCAGTCGTGGCACTAATGAATCTGAGCACTCCCCTTTTCAATAATAGAATATCCATTGTTATAAGGAGGA
AACACCCCGACTCATCCAACAACAACCCTCACAATTAAGCGACATGTGCACAATAGTCCACTTACCCGCTCCACACAAAACACTANCCCCCTCCTGCACG
ACATGGCACACACGCGCCGAATGAACGCCTCATCCATGCACACGACCCTCACTTGAACATCACTAAACNGGTCACATAATTCCATCCACTCACATACTCC
AACCCTCCACCCTCTTGTTGATCTCCGGTAACCGAAGACACCACTTCGTGAGAGCACTGACCCCATAGAAACTATGACTCCTCTTNCTCTTCACATACCG
GGGCTGCTCCCATATCT
CACTTCCACACCTAGCACACTGATAATGCTATAACTAAGAAGGATATCGAATTTCATCATCAGTANGATACAGAGTTGGTGCA
CTGCTCGATCGACGTGCGCACTCGATCCTCGATACAGCTCACACCGCCCACGCACTGCTCACACCCGACATCCGACCTTACTACCGCACAGTACCGCGGC
TTCCTTACTGTACTAACCATGTACATCAATCTAATCACGTTTTCCTCCCTTTCTGGCAATGCACCCACATCCAAGTCATACCACAGCAGGCAGCTCTCCA
ACTAATGCACCACCTCACACAAGCGTTCGCTCTGACCAAGTCACATGATACTCTCATCACAACGCAATACAACGGCACCTCGCGACTATGCCCTATTTAC
CGTACTATGGTAGTCAGACATTGCTCTCTTTGCTAGCTATCTCTGCATCTCGACTCACACAATTGGACCAACCGCTGCAGCGATACAGTTAGACGACACC
GATCCCCTCTGGACCTCAGACTCCGAAGCACTGATCACTAGCACGCAATCTAGCTCGAACCATAAGTCTGCACAAGTGGTGCTATCTCCACATCAGCCAC
AACTAATTATATAAACATTATGTTGACATAGAAGTATTGTTATAGCTATTATTCTACGTACAATGTAGAAAAGTCAATGTCTCTCACCAAAATCATCAAN
TAACGATGCGATCATACGTTCACACCAATACCGGAATGTAC
>LE_HBa0158G10_T7_102835 (trimmed for quality and cloning vector)
CA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.24822
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0158G10
Clone
Clone name
hba-158g10
LE_HBa0158G10
C03HBa0158G10
P158G10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found