Clone Read LE_HBa0172F09_T7_104321

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0172F09_T7_104321
Primer
T7
ID from Seq. Facility
LE_HBa_172_F09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
13 trimmed for vector and quality, 897 raw
Sequence
>LE_HBa0172F09_T7_104321 (raw untrimmed)
GCCCGCGTCCCCGGGGGGATCTGCTAGGAGTCGACTAGCAGGCTGGCAGGCTTCTCTCTATGCAAACCACATATCTTTTTGGGGCTTAACCCTGACAGTC
CGACCACAACTCGTTCCTTAACAGGTCTTCACTTAGTTCGACAGAGTTGTTCGACAGATTAATACATATATCAGTTACATCTCTAGCCATATACAACTAC
TAATGTTTACTGCTTACTCACAATGATTTTCATGAATGATTCTCTCTTTCTAAAGAGTTACGTAATAATTTATTGTCTTTTTTGTATATTGTTCTTGAAC
TTTCATTGATCGCTCTTGACAATGTATTGAGATATTTCAACTTCATGCTTGCTGGACCCCCAAAAATATTTACTATTTTTTCACGTTGTATATTCAGAGG
TCAACATGTGATCGCTCTTTTGCATCAGACTTCTTTGACGACTCATATCATCGTCGTTAGATGACTCAGTGTATCAACTACCCCCCCCCCTCCGGCGACC
TGACTGATGCCAAAAGCTTTTGTTTTGTTTTTTTTCTTTTTTTCTTTTGTTTTTTCTTTTTCTCTTTTTTTTTTTTTTTTTATTTTTTTTTATTTATTCT
TTTTTTTTTTCTTTTCAATCTAATAACTCGACCTGTCTTTCTTTAGATTAGAATTAAACAGCTTATTGATAACTTTTCTTTTTTTTTTTTTTCTTTTTTA
TTTTTTTTATTTTTTTTTTTTTCTTTTTTATTTTTTTTTTTTTCTTTTTATTTTTTATTTTTTTTCTTTTTGTTTTATT
TTTTTTTTTTTTTTTATTTTT
TTCTGTATTTCTATAGAATCTCATTTAATTCTTTCGCGACCTCTCGAATACTCTCTTTCGTTTACTCTACTTGCCTTCTATTCATCTCACCATTGCT
>LE_HBa0172F09_T7_104321 (trimmed for quality and cloning vector)
TTTTTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.118567
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0172F09
Clone
Clone name
hba-172f9
LE_HBa0172F09
P172F09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found