Clone Read LE_HBa0172K24_T7_104591

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0172K24_T7_104591
Primer
T7
ID from Seq. Facility
LE_HBa_172_K24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
13 trimmed for vector and quality, 864 raw
Sequence
>LE_HBa0172K24_T7_104591 (raw untrimmed)
TAATGTATTTGTTATTTAAAAAAAATGGTGTGCCGAGGTACTCTAGGGTGGGATGCATGCTTGCAAGCTGTGTGAATAGCATACTACCTTCCATAAAAGT
GTAATTAGAGAAANANAAGANNAGAAAAGATCCCTTAAGAGGAATCTTATGTTAAAATGGTAGNATTTGTTGTTGTGTTTATTTGTTTATTGGTATGGAG
ATATTTTTAATGTGTTGAAATTAGTAAAAAGGGATATGAGGTATTTAATAAATGAGGAAAAGGTTTGAGGTATTAAATTTTATGATGGGGTAGATGAGTG
ATTAAGATAGAATATGGTATATTTTTTAGAAAAGAAGTGAGAGGGGATTTNAAATATAATAAAGTGTAAAGTA
AAAAAGATTATAAGGTGGGAGATAAAT
NTAATATTGATTGTTNAAAATATATTAATAGTAAGAAAATATTTTANAATAGATGTATGTTGTGTAGATTTTGTGGATTTGGTTTATAAAGANTTTGTTT
TTTTATTTTTTATTTTTATTTGTATATTTTTTTTTTTTTTTTTTTGTTTTTTTTGATTTTTATATTAATTTTATTATTTTATTTTTTTTTTTTTTTTTTT
TTTTTTATTTTATTTATTTTTTTTTTTTTTTTATTTTATATATTTATATTTTTTTTTTTTATTATTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTT
TTTTTTTTTTTATTTATATTTTTAATTTTATTTTTATTTTTTTTTTTTTTTTTTATATTTTTATTATTTTTTTTTTTTTTTTTTTTTTATTTTTTTTATT
TTTTTTTTTTTTTTATTAATTATATTTTTTATTTTTTTTTTTCCCGGGGCTTTTTTATTTTTTC
>LE_HBa0172K24_T7_104591 (trimmed for quality and cloning vector)
AAAAAGATTATAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.168802
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0172K24
Clone
Clone name
hba-172k24
LE_HBa0172K24
P172K24
Clone type
BAC
Contamination
none
Estimated length
80,581
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found