Clone Read LE_HBa0173E01_SP6_105024

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173E01_SP6_105024
Primer
SP6
ID from Seq. Facility
LE_HBa_173_E01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
714 trimmed for vector and quality, 822 raw
Sequence
>LE_HBa0173E01_SP6_105024 (raw untrimmed)
CCGCGTCCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCCTTTTGAGTTTTTAAAAATAATTTTAGTGGCAATTTCAATTATTTTTGTTT
CTTTCAAGATCAACAATCCATCTAATATAGTAAAATTGCATTAATACTCTAATTTATTGATATTTGTAATCATCATAAAATTCAAATTAAAGATTTGTTA
AATCTTAGTAAATAATGACTTGGAACAAAATTTTAGAAATTAATTAAATAAAAATAATTAAGCAATATATTATTTAAGACTCCCAACAAATACACTATAC
AGTGATAACATATTAAATTGTACACATTGTTTTTCATCTATAAATAATATAATCATAAGAAACTATAAAAAATAAATCAATTAATGAAAATTATAAAAAT
CAGTCTTTCAAAGAAACCAATTTTCTTTCTTTCATACCTCATGAATCTTGCTAATGTTGATGATGGAAACGGTAACCTTCATATATCATCCCACAAAGTT
TGAATTTGGCAATTCTTTGATTCCATTATATATTCATTAAATCTACATTCTTCACCATCTATTATTTCATGCAAATGTTGTTTTAAAGAAAAGGGGAAAA
TGATGAAAAAGAAGTCGAAAAACAAAGATAAAAGAAATCCTACTCAACTGAAACATGTCCATGAGAAAAATGGAAACAATTTTCTTTGATGTTCTTTGGG
ATTCCTTTAACAGATTTTATTAATAGTATGTATTAATTTAAATTAGTCTACATTTAATTACTATAAAGCTTTTAAAATTCTGCACAAAATATATATTTAT
ATTTATTTACTATTATATATAC
>LE_HBa0173E01_SP6_105024 (trimmed for quality and cloning vector)
AGCTTCCTTTTGAGTTTTTAAAAATAATTTTAGTGGCAATTTCAATTATTTTTGTTTCTTTCAAGATCAACAATCCATCTAATATAGTAAAATTGCATTA
ATACTCTAATTTATTGATATTTGTAATCATCATAAAATTCAAATTAAAGATTTGTTAAATCTTAGTAAATAATGACTTGGAACAAAATTTTAGAAATTAA
TTAAATAAAAATAATTAAGCAATATATTATTTAAGACTCCCAACAAATACACTATACAGTGATAACATATTAAATTGTACACATTGTTTTTCATCTATAA
ATAATATAATCATAAGAAACTATAAAAAATAAATCAATTAATGAAAATTATAAAAATCAGTCTTTCAAAGAAACCAATTTTCTTTCTTTCATACCTCATG
AATCTTGCTAATGTTGATGATGGAAACGGTAACCTTCATATATCATCCCACAAAGTTTGAATTTGGCAATTCTTTGATTCCATTATATATTCATTAAATC
TACATTCTTCACCATCTATTATTTCATGCAAATGTTGTTTTAAAGAAAAGGGGAAAATGATGAAAAAGAAGTCGAAAAACAAAGATAAAAGAAATCCTAC
TCAACTGAAACATGTCCATGAGAAAAATGGAAACAATTTTCTTTGATGTTCTTTGGGATTCCTTTAACAGATTTTATTAATAGTATGTATTAATTTAAAT
TAGTCTACATTTAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.879584
Expected error %
0.61787
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173E01
Clone
Clone name
hba-173e1
LE_HBa0173E01
P173E01
Clone type
BAC
Contamination
none
Estimated length
60,186
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found