Clone Read LE_HBa0173M12_SP6_105430

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173M12_SP6_105430
Primer
SP6
ID from Seq. Facility
LE_HBa_173_M12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
275 trimmed for vector and quality, 938 raw
Sequence
>LE_HBa0173M12_SP6_105430 (raw untrimmed)
TTGGGTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGAATTTTTTAAAATTCGTGTATTTTTTTGTGTGATGTTGAGAATGATTTGGA
GACTTGTTTCTTATTTGTTGGTTTTTATCAAAATGGCTATCTTCTCATTTTCTAGTATGTAATTCACAGTGCATTAGAAACATTGTTGTGATAAGAGTTA
TGTGATAAGAGGATGTACCATTTCGAGGGTCGTATCGCTTGCCCCGATGGAGATTATAATTCGAGGGATGTATCGCGCGCCTCAAAAGTTACTACTGCTG
AGGTTCGTGTCGTGACCCTCTTACATTGTGAGGTCAAATATGTCCCCCATTAGATCTTAGAGCGTATCATAATCTGATTTTTTCATACAAGGAAGAATGT
TCTGTATTTTTCCTATATTTTTTTGCGTTCTGCTACTTCCCCTCTGTATTTTCTTAACGAGGCTTAAACACAAGATTTGATAATTATTTTTTAATCATCC
TCTCTGTAATCTTTTCTTACTCTTTTTCTTACGTTATAATTAAATTTGTACATCACCATTCTTCCCTTCATTACATCTCTTTTCTTTTCAGTGTATCTTT
TTATTCCTTTTCGAAAGTTTTCTTTTTTATTTAGTATTTTTCATTGTTGTTATTTCACGATGTTCTATTATTTACTATATCAGCTTATAATTTTTTCATA
CAATCAAATTTTTTATTTTTTTTATTTACTAATTTATTTTGTCTTATTCTTAATGCGCTTATAGCTAACTCTTGATCGTTCTACTTTGTTGCTTACTTAT
TGTGGCCTTACTTCTCATATTATCTCTTCTCCTTTTGAACTACTGCCTTTCTTTACTTCCTACATTGATATCTCGTTGATTAGCTTCTTTTGTGACTTAC
AAACCATTTTTTCTTCTTTAGTCTTCATTCTTTTTTTT
>LE_HBa0173M12_SP6_105430 (trimmed for quality and cloning vector)
AGCTTGAATTTTTTAAAATTCGTGTATTTTTTTGTGTGATGTTGAGAATGATTTGGAGACTTGTTTCTTATTTGTTGGTTTTTATCAAAATGGCTATCTT
CTCATTTTCTAGTATGTAATTCACAGTGCATTAGAAACATTGTTGTGATAAGAGTTATGTGATAAGAGGATGTACCATTTCGAGGGTCGTATCGCTTGCC
CCGATGGAGATTATAATTCGAGGGATGTATCGCGCGCCTCAAAAGTTACTACTGCTGAGGTTCGTGTCGTGACCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.930377
Expected error %
1.57058
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173M12
Clone
Clone name
hba-173m12
LE_HBa0173M12
P173M12
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found