Clone Read LE_HBa0182B24_T7_105695

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0182B24_T7_105695
Primer
T7
ID from Seq. Facility
LE_HBa_182_B24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1096 raw
Sequence
>LE_HBa0182B24_T7_105695 (raw untrimmed)
TCTACAACCTAATAATTAACTAAAAACATAGCCCGGAGGATCCCTAGAGTCGACTCTGCAGGCATGTCAAGCTCTTTATTCTTCCTACCAAAACCCCACC
CTTTCAAAGAGAACCTTTATGTAGCCTACGTTCCAACCTACAGAGTCCCCTTTCAAGAGGGCCTTAATTAATATACATACCACCAACTACCTATTCTATC
ATTTATGATATAAGTCATATCACATTGTATCTTATATATATTATATATTGTGACAGTGATCCTTCTTAGTCGCGATATCAAAACCTATAGTCTAACACCC
CAAACAACAAACTACTCAGACGCTCTACGGTAGACAAACAACAAACGGCACACCATCCAATACTTTTTCTTGATTTGTATTAATGTTTATATATTTATTT
TGCTATACTTTTTTTTCAAACAACCTATTATGTACCAATAGACAAACAAAACACAACTATTAATACAAACACAAAATATACATCACAAAATAAAATACTA
CACATACCCAACTAAGCGTCAATATATTTTATTGAAACGATAACCCTACAACAACCCAGCACCGAATCTACCTTATGACTAGCGGAGCCAATATAAAATA
AGGGGTGTATGTTAAAATACCTTCTACAGCTCCTACAATTCCACGCAAACTGCATTCGCGCCGATTATAAACACATAAAACAAAATGAGAACTCGTGCCT
AAAATAATACTATCCCACCCCTATTTTTATACCTGAATCCTTCTAAACCCGCGTTACATATAGTGATAATAAATGACATAACAGCACACCACAACTCCCT
AACATTCACCCATACGATCTTTACCAATAAATTATTACACAATACATTAATACCAAGTCTGGTAACCTCCCATTTATCCCGTTGGTAAACACACCACCAT
ACTAACTACAAGGACGTGAACAAGAGAGACAGCAGCAAGGACGGAAACAAATAACAACAACATGCACGTCAAACCACATTACCTCCTACATAATAGACTC
GAATCCATCTACTATCTAATGACACACCCTCCACATGTCTCCATCATGTAAACATGCACTACAATATGTATAATTAATCGCAAATAATCCAGGAAT
>LE_HBa0182B24_T7_105695 (trimmed for quality and cloning vector)
CAAAAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.314728
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0182B24
Clone
Clone name
hba-182b24
LE_HBa0182B24
C08HBa0182B24
P182B24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found