Clone Read LE_HBa0182O06_SP6_106282

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0182O06_SP6_106282
Primer
SP6
ID from Seq. Facility
LE_HBa_182_O06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
50 trimmed for vector and quality, 772 raw
Sequence
>LE_HBa0182O06_SP6_106282 (raw untrimmed)
CTTAATGGTTTTAATTTCGTGAATATTCCCCTCTGAATTTGTTGGCTGTCAAATTTATTTTGCATGCTACTCTATGGGGGCACNGCGAAANAGNAAACAA
CGCCGAACCCCCTTTCGCACGGGAGGNAGCCGAACAACGCGGANNGCAAGCAAGCACGCAGNCACGAGCAGAGGAAACGGAAGCAGAACCACGGGCGGGG
GAAGAAGAAGAGGAGAGAGCAGCCCCCACGGCCCAACGGCCGCAGAGCGACGGAAGCGGGGCGACCCCCGGGGCAAAGAGGGAGACAGCAGAAAGNGCAA
AGCCACACAAGGACACGACCACGCACAACCGAGAGCCGGGGCCCAAAAGCAACGAAGAGAGAGGCCGCCGGGAAACGAAACCGGGCGAACAGAAGCAACN
CAGGGAAAAGAACCGACCACCAAGAACCACCGGCGCAGCCGACAGNNACAAGGAAANAACACAGGGCACGAGCAGAAGAAGCCAGGAACCAANACAGAAA
CCGGCCAAACAAGCAGCNGAACCNGAGNNNAGCAGCAANNCNACNGANNGCAGAGAACCAGNAGNGAAGCAGAAGGNNCNNGAGGCNGACAACCNCNCNN
GGANGCNNGAAANNNNAACNGACAGGCAAGCAGCAGACGAAAANGCGGGGANGNGGGCNAGCCAGCAGGAAACGGCCCCACCGCACACAAAGCCACCAAN
CGCGCCCCGCCACCAGGNCAGCCGCACCACAGCAAAGCCNANGGAAGGAAAAGGAAAAGGGGAACCNCGGCC
>LE_HBa0182O06_SP6_106282 (trimmed for quality and cloning vector)
TTCGTGAATATTCCCCTCTGAATTTGTTGGCTGTCAAATTTATTTTGCAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.829351
Expected error %
0.112947
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0182O06
Clone
Clone name
hba-182o6
LE_HBa0182O06
C02HBa0182O06
P182O06
Clone type
BAC
Contamination
none
Estimated length
44,934
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found