Clone Read LE_HBa0189A22_T7_106411

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189A22_T7_106411
Primer
T7
ID from Seq. Facility
LE_HBa_189_A22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1161 raw
Sequence
>LE_HBa0189A22_T7_106411 (raw untrimmed)
CACCACATCTTTCTTCTTTCTTCATGTCGGGCATCCGGGGGAAACTTCTAAAAGTCCGACCATGTCCGCGTCATGACAAGACTGTGGATAGCCTGCATAA
CAACACATGTTTCGTACTCAACAAGCTCTCTAATATTGTTTGCACAGAGATCACATATGAGGGGGGTTCTTCTTCTTGAGTACACAATGTCCTATAGATC
TATCTAATTTATTTATCTTGTACCTAGTTTATACCTCATATGGGAGTTTACTTCTTTTTCAAACGAGATGCTAAATACATCATCCACGAGTGTGCACTGA
TTGTCATGAACTCCTACTTATTTATTATTTTCTTTGATCCTTTTCTTATTTATCATATACTGCACGCGATTGGTGGGTCA
ACAGTCTATAGCGTAGCAGA
TATATGCTCGTCAGTCTTGTGACTTTTCGTCTGCCAAGCACGTGGCGGAAGCAGGTCTGCTAACATTGTTTTTATATCAAGGGGGGATGTATCAAGTTTA
TATGCCCTATTTTATACCATCTATATTCTCACTAAATGAGCGTCGTGATCAACATCTGCATCGCTTATCAATAAATTCTCAACTTATATTCATGGTGATG
CTACTCAAGCGCTACTAGGCCTACCGGTAGTATAGATACAGACAACAAGATGAGTGCTTCGTTACTCTAGTTGTTAGATTTCTATTTGTTACTGCTATCC
TGTCCCGCGTGCTTGAAACGCGCGCCAAACGATGACTGTTGAATGTTTCTGATTGATGACTTTTCTGACGACTGACTCGGCATGATTGCTAGCTCTTTAT
AGACTCTAATCGTCTGTGTCGAATGCCACTGCATATGATATGCCGGCCGCCTCCCACATTAGTACTATCTTCTCGACGTTGGCTAGGCTCGAACACTGCG
ACGAGATGTAGACCGGTCCCGTTTAGTGATGTTCTGCCGCCACGATCAATTATGAAACTGCGGACGATAAAAATATGCGCGCGGTACATTCTTGCATTGT
GCACATGCGACTACCTCTCATCAACTCCATATCTTCAGTACNCACATGTGTATAGAATCACAGACACGCATCACTCTACTCTCATATGTTGATATGTACG
TTGCAACATACATCTAGCCTTGTTTGTACTCGAATGTCATGCATTCTTCGTTTCCGCGATG
>LE_HBa0189A22_T7_106411 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.9031
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189A22
Clone
Clone name
hba-189a22
LE_HBa0189A22
C12HBa0189A22
P189A22
Clone type
BAC
Contamination
none
Estimated length
79,025
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found