Clone Read LE_HBa0189E07_T7_106573

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189E07_T7_106573
Primer
T7
ID from Seq. Facility
LE_HBa_189_E07-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1213 raw
Sequence
>LE_HBa0189E07_T7_106573 (raw untrimmed)
CTTAGCAGCTCGCGCGTCGGACCCCCGCGTGGGATTCCCCCCACTCAATGTCCAACCCCCCGCAGTGCCATAGCACAGGCTCTCTGACATAACAATCTAT
TGCAATCGAACTCTCCCAACATATCATGTTGCCGTTGTAAACGCATGTGGAACAATAGCTTTCAGTATGACGCGTTGTCTTACATGTCTCACTTGCAGCA
TGCTCTTGTTGACTGCTCCTCGCATATCTTCGTACACGTAGAGTGTACATTTCCTGTACTGGTACGTACTATGTCATTGATATAGATAGTGTGA
TGCATA
ATCATCGCACTCTCAATGTTGGTCACTATAGTCTAAACAAGTACAAATNCTCACTAGTTGCTCTAAGACTCGTCGAGTAATACTTATGCTAGGATCTACA
CATTTCTCATGCCTCCATGTTATTCACATCTTCATTAGCTAAATATTACTGAAGTTATAACTGGTCATCCCATGTGTTAATTGTCTGATACATCTATGTA
CTGCAACTTTATCACTCTACACNACTAAAATCTATACTGTTTATTATCTGATCTCTATATCGGCTTCCTAATCCATAAGCTCATAATGGCATGTAAGAAA
TTGTAGTGTACATGCTCTTCGCATCATTGTATTGACGTGCAAAACTATCAAAGTAGCTATCCGATGTTCTCACAAATCTTTCGTTTTTATTTACATGGAT
CACAACAGCATAACTTTCTGATTTTACTACCCTTTTATAGTCCTAGGATCTTTTCAGATCAATATCCTCAACACTCGCCAATCCTCCATCGAGGTCTAAC
AGTTCTATCCGCACTATTCATTCCCATCACGTTCACTATCCAATCTCGCTTACACAACTATACTTCGCGCTTGCGCGATATCGGCTTTATGTGCTAATTT
CATATATGTCTCGCCGCTTCTATACTTTGTTATTATTTCAATATCATTTCTTTGTGCTACTTAGCCGTTAATTTATATCCACCTTGATATACATTATCAG
CTAATCATATTGCTCTTCTATACATAACTACTCTTCTCGTCCCCTCCTACACCTTAGTCAGTCATATCAGCATCCATCACAATGATCTGATCGATACGCT
TCCCAATACTTATGCATCCATCGTCATTACACAGGTCTACCCATGCTATTCTGACTCCGTAATTCTTTTCCTCTGCAAATATACACTGTTCTAGTGTTAA
ACTTATGTGCACC
>LE_HBa0189E07_T7_106573 (trimmed for quality and cloning vector)
TGCAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.28033
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189E07
Clone
Clone name
hba-189e7
LE_HBa0189E07
C12HBa0189E07
P189E07
Clone type
BAC
Contamination
none
Estimated length
128,089
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found