Clone Read LE_HBa0189I08_SP6_106766

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189I08_SP6_106766
Primer
SP6
ID from Seq. Facility
LE_HBa_189_I08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
695 trimmed for vector and quality, 1007 raw
Genbank Accession
Sequence
>LE_HBa0189I08_SP6_106766 (raw untrimmed)
CCGGGGTTATCCTCATTTGTCAATTAATTTGGATAACTCCATTATATAATTTGCAATACACCATCCTAGCTTGTTGTTCTTTATCTCCCCTAATTATGTT
TGAAACTAAATATCTAGGCATAGTGACAAGTAACGATATCCTATCTGACATCTTACATGTATTATGTACTCAGCCATATTAATGTTGATATCTCTATAAT
GATCTTGAAACGTTGAGAGCCTACCTCACACGATATCGAAGGGCGAGTCCTTACTAGTTAAAGAAAACAAATTTTAAAGTTCCATAACCGCGTGATACTA
TAGTACCTAGACAAAAAAAACTTTCAAGTTGTTCTATTTAACTTGAGCCTATCAATTTTTCATAATTTGGTATAATTATGTGTTAACTTATGATTGGAAA
TTTGCATGAAATTATTCTCAACCCTTTAACCAAATCTGACCTAATACCACATTTAAAAACAACTAGAAAACAGAAGAGCAGAGCAACCACATTTGAATTA
TCTCATAAGAGGGAGCAGTTTGATTTTAATGCTTTTAAAATTCAAAACAACCAAATGACCATGTGAACTATTTTTGGTTGTATTATGATCAAAGAATGTT
AATATTTGTTTATTTTTCCAATTAGGCCTATTATTAAGGGTTAAATTTGAAGAAAATATAAAAAAAATTAGTTGGATTATTCTTGACTAAGAAGAACACA
AGCATATGAAGACAAGTGATTAGTTACTTTACACGGGGATATCTTCGTGACAATAACAATTAGCCTTGAAGTTTTTGCTTACACCAGTGGCCCGAGTCAG
AAAATTTTAAATTTATCTAGATTTTAAACTTAACCACAATTAACTTGTTGAACAAAATTATTGAGTTCCAACGAAACCTGACCTTTAGCTTCGCCAAGTG
TTGTTTAGTTAAACTAGAAAAAAAAGCAAAATTNCCTTGCTTTATCTACAACCAAAGTGTTACTTAACACATTTTTCGAACAAACCCTTCATGTGACCTC
TAATATT
>LE_HBa0189I08_SP6_106766 (trimmed for quality and cloning vector)
AACTCCATTATATAATTTGCAATACACCATCCTAGCTTGTTGTTCTTTATCTCCCCTAATTATGTTTGAAACTAAATATCTAGGCATAGTGACAAGTAAC
GATATCCTATCTGACATCTTACATGTATTATGTACTCAGCCATATTAATGTTGATATCTCTATAATGATCTTGAAACGTTGAGAGCCTACCTCACACGAT
ATCGAAGGGCGAGTCCTTACTAGTTAAAGAAAACAAATTTTAAAGTTCCATAACCGCGTGATACTATAGTACCTAGACAAAAAAAACTTTCAAGTTGTTC
TATTTAACTTGAGCCTATCAATTTTTCATAATTTGGTATAATTATGTGTTAACTTATGATTGGAAATTTGCATGAAATTATTCTCAACCCTTTAACCAAA
TCTGACCTAATACCACATTTAAAAACAACTAGAAAACAGAAGAGCAGAGCAACCACATTTGAATTATCTCATAAGAGGGAGCAGTTTGATTTTAATGCTT
TTAAAATTCAAAACAACCAAATGACCATGTGAACTATTTTTGGTTGTATTATGATCAAAGAATGTTAATATTTGTTTATTTTTCCAATTAGGCCTATTAT
TAAGGGTTAAATTTGAAGAAAATATAAAAAAAATTAGTTGGATTATTCTTGACTAAGAAGAACACAAGCATATGAAGACAAGTGATTAGTTACTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.932189
Expected error %
0.258269
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189I08
Clone
Clone name
hba-189i8
LE_HBa0189I08
P189I08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found