Clone Read LE_HBa0189N24_T7_107039

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189N24_T7_107039
Primer
T7
ID from Seq. Facility
LE_HBa_189_N24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1189 raw
Sequence
>LE_HBa0189N24_T7_107039 (raw untrimmed)
ATCTTTTAGGGGACGGTTTTTAAACCGGGGGCCGGGGGGTATTCCTCTATGAAGTGCGACCTTGCATGGCATTGCAAAGCGGTTTATATAGTTGTGAGGT
TAAGAATTACCCCTTTATAAGTGGGCTTACAAACTATTTATACAGTAGTATGAGACCACAAGGTTTCCTTTTATGGTACCATTTGCTTTTGTATAAAGAC
GAACGAGCATTATATAATGTTGTAGGCTGTGGGAAATGTTTTTCACGTATTAATTATGAGCTATGTCACCATCCCCCTCACACTCAAACAACTCGGACCC
TCCCTCATCTCTGTTATCTCGGCACGAAAAAGACAACTCACTATTAAATTTATTTTCACTATAAATCTCTTTTTATACTATCTCGAATAGTTATACTAGT
AATCACCATCTATGTAGCTTCGTTCTTCTCCTATGCAAGCATCATTTATTACCCTCTTTATTCTCCTTAGTCTCTTTACTTGCTTATGCATCTTATCATA
GTATCAGTTAGAGACATCACTTATCTGTCTTAGTAAGAAGATACAAGTACTTATAGAAGTCGGCTAGTCTTGCATCAGATTGCGATACGTAGCTTAGAAT
CTTCGAAAGAATTCTCAAGCTAGCTTCGTTGTTATTATATTATGTATCCTTCCTATTCATCTCTGATTGCCTTCCATGCACCCATAGTAAAGATAGCATT
TTTTCTTATCTACACTATCCTGTATAAATCATAAAATATTTTATTAGTTCTTCTTAAAAAAACAATAAACACAGAGGCATACGCCCGTAAATTAATCATT
GAAGATATCCTCAAGCTCTACACCCGTTCTTATATTCTACACATATCTCGCCCCTAAGGTGGAAATGCTAACATATTCTTAGGTCAACAGTCTATCAACT
AACCTAACATATAATTCATCTCTTCTTCTTCTTCTCTTCTTCTACCTATGTCACACGTTCAACTCTCTGTTATTTCTTACATAATAGACCTTTCGTTATG
ACTAAATATGATAAACTAGTATTTAACTACCGTATTTCATCTCGTGTATGAATGTACTACAATATGTATACCTCACGTCTGTTTTATGATTGGTGTAGCG
GCTAAAATATTCAATAGTAGGATGAAATGATAGAGAGAGAGAGGGAGTGGACGAAGACTGAGTATGGACGTAACTAATGAGAGTCAGAA
>LE_HBa0189N24_T7_107039 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.15575
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189N24
Clone
Clone name
hba-189n24
LE_HBa0189N24
P189N24
Clone type
BAC
Contamination
none
Estimated length
139,082
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found