Clone Read LE_HBa0190F02_T7_107379

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0190F02_T7_107379
Primer
T7
ID from Seq. Facility
LE_HBa_190_F02-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 890 raw
Sequence
>LE_HBa0190F02_T7_107379 (raw untrimmed)
TGGGGGAAAATATACAAAGATCACCCCTCTCATTAATTGATGGTCCTCTCTATCCTACGGTAAGCCAAATGCTATAACACACTACATTAGAGTGATTGCT
ACATGACTAGAGAATTAGTATACTTGCTTACAACGATCTCCATATAGCGGTATCTAGCTAACATCTATATGCTTACTATGCACGATACGACATAATATCG
ATCTATTGTAGAAAGTGGGTACCTTACACATTAGCTCTTAGAATTTTTTATTATATACTTTTTTTTTTATATTTTTTTTTTTTTTTTTTTTTTTTTAATT
ATAGATTTGTTCTTGTTTTTATCATTATTTATATTAATAACATTTATCTTTCTTTCTCTCCTCTGTTTTCTTTTAATTTTTTTTTT
TTTTTTTTTTCTTT
TATCTTATTATATATAAAAATATAATATATCTTAGCAGCTCTCTATTAAGATTCTATTTGCTTTGTTTCTTTTATTTTTTTTTTTTTTTATTTTTTTTAT
CCTCTCTATCCCATTTACTTCTTCCCTTTCTTTCCTCTATCATTCTCCTTAAAACTACGGTTCCTCGTCACTTAACTACGCTCCTTAACTATATACCATA
CCATTGTTATTCTATATAACCAGTTCTTAATGTTTACTTTCTTCAAACTTTAGGCCAGTCACACTCCCTATCTTCCGCGTGATTCAATTACGTGTCCTTT
TTTTTTTTTCTGTAGTTTACTATATCCTCTCCTCTTCTTATAATTACTCCTCTTTCTAATATCGCTATATGATCCTTCCAATTTATACACACATTCAATA
ACGACAACAAAAAAATTATTGCATTTGGTTTATAAGATCCACTTATCTATACTAAAGTCTCAATTCAAGGATCTCTATTATCTTTCCTAT
>LE_HBa0190F02_T7_107379 (trimmed for quality and cloning vector)
TTTTTTTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.419541
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0190F02
Clone
Clone name
hba-190f2
LE_HBa0190F02
P190F02
Clone type
BAC
Contamination
none
Estimated length
127,474
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found