Clone Read LE_HBa0190J18_T7_107603

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0190J18_T7_107603
Primer
T7
ID from Seq. Facility
LE_HBa_190_J18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 1116 raw
Sequence
>LE_HBa0190J18_T7_107603 (raw untrimmed)
ACCAGCAGGGAGGGTAAGGATAACATCGAAAGAAGGTAGAACCTGGGAAGGGAATGAAAAAGCATTGTTGATTAAATTTAGGGAAAAACAACCATATAGA
ATGAGATCATAGTACCTTAAACCGGNNNNNGNGNGGGNGNNNTGTGGGTGNGNNGGNGNGGTTTTTTGCTTCTAAAGGAGGGGGAAATAAAGAAGGGGAA
GGGAAAGATGAGAGATAGAAATAAATAATAAATTATTAGAATAATGAGATGGTGGTGGGGAAAAAATAAAAAAAAAAAAAAAGCTAGGGTTAAGNTGTGT
TAAATAATAAAATAAAAAGATATGATGGGGAGAAAGGACGGAGGAAGATATAGTGGGTACATAGAAGTNACTCTAATANTGNGGGGGTTAGAGNNAANAA
ANANNNNNNNNNNNTGNNAGNNNNNNNNNNNNNNNNNNAGNNNNNNNNGTNNNNNNAANANAATAGAGAGNGGGAGGAAAAAGAAAGAAGAATGATAGTT
ATGTAGAAGATAAAGAAAAATAGTAAAAGAAAGTAGNANAATTAATAATTTTTTTTATTTATTAATTAAAAANGAATAAAAAGGAGTAAGTNAGAAAATT
ATTTGTGTGTAGAAGTGATATAAATTAGGTATATGAAAATTGGNAGTTGTGTGAGGAGGAGGTAAAGTTGTGTTATAATATGAGTATAGAGAGAAAATTG
ATATTAAGTAATATGTGTAAAGAAAAAGTATATTATTGAATAAGAAATATTAAATAATTAGAATGGNTTTAAGGTNNTATTAAAATAATAGAAGTGTATA
TAAAGTTAGATTTATTGAGAAGAGAAAATAG
AAAAAAAAAAATTAAGAGTNTTTTTTTATAAAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTATNT
>LE_HBa0190J18_T7_107603 (trimmed for quality and cloning vector)
AAAAAAA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.87211
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0190J18
Clone
Clone name
hba-190j18
LE_HBa0190J18
P190J18
Clone type
BAC
Contamination
none
Estimated length
106,962
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found